Detailed information NTG0390170

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FSC10_RS07090
• Genome accession: NZ_CP044463
• Coordinates: 1440195..1441400 (+)
• Length: 401 a.a.
• NCBI ID: WP_163171282.1
• Uniprot ID: A0AAE7BX67
• Organism: Acinetobacter schindleri strain HZE23-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1435195..1446400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC10_RS07075 (FSC10_07100)	-	1436261..1436791 (+)	531	WP_004809525.1	hypothetical protein	-
FSC10_RS07080 (FSC10_07105)	-	1437313..1438362 (+)	1050	WP_004809523.1	3-deoxy-7-phosphoheptulonate synthase	-
FSC10_RS07085 (FSC10_07110)	pilU	1438607..1439785 (+)	1179	WP_163171281.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC10_RS07090 (FSC10_07115)	pilU	1440195..1441400 (+)	1206	WP_163171282.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC10_RS07095 (FSC10_07120)	-	1441458..1442636 (-)	1179	WP_163171283.1	MFS transporter	-
FSC10_RS07100 (FSC10_07125)	gcvH	1442867..1443241 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
FSC10_RS07105 (FSC10_07130)	-	1443314..1444342 (-)	1029	WP_004809513.1	AraC family transcriptional regulator	-
FSC10_RS07110 (FSC10_07135)	-	1444495..1444944 (-)	450	WP_076753627.1	MaoC family dehydratase	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 45225.61 Da
• Isoelectric Point: 6.3946

>NTDB_id=390170 FSC10_RS07090 WP_163171282.1 1440195..1441400(+) (pilU) [Acinetobacter schindleri strain HZE23-1]
MFTAELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQELTPEKTKLFAYALMNEKQRKEYEAELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPESLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIVSQRLVRTEDGKGRRAAVEIMLNTPLVSDLILKGDFHELKAIMGKS
RELGMQTFDQALFDLYNEGAISYEEALRNADSTNELRLQIKLKSTRANPAMNNTATAFSMMEEKKPDNETDEDASSTEQS
S

Nucleotide

• Length: 1206 bp

>NTDB_id=390170 FSC10_RS07090 WP_163171282.1 1440195..1441400(+) (pilU) [Acinetobacter schindleri strain HZE23-1]
ATGTTCACGGCAGAGTTATTAGAAGAAGCACGTAAGTTTATGCATCATATGCTGACCAAGGTCGTTGAATATGGTGGTTC
AGACCTGTTCATTACCGCAGACTTTCCTCCGAGTATCAAGCATCAGGGATTAATGAAACCTTTTGGGCAACAGGAACTTA
CCCCAGAAAAAACCAAACTGTTCGCCTATGCACTCATGAACGAAAAGCAGCGTAAAGAATATGAAGCAGAACTGGAATGT
AACTTTGCCATTACTGTACCGGGCGTTTCACGTTTCCGTGTCAACGTGTTCCAGCAGCAGCTTAATGTCGGCATGGTGAT
CCGGACCATCACTGCAGAAATTCCGAATTTCCAGAAGTTAAAATTACCAGAGTCACTCAAGCATGTGATTATGGAAAAGC
GCGGTCTGGTACTCGTCGTGGGCGGTACAGGTTCAGGTAAGTCGACTTCGCTTGCTGCGATGATTGATTATCGTAATGAA
AACTCAGCAGGCCATATCATTACCGTAGAAGACCCGGTGGAATATGTACATAAACATAAGAAGTCAATGATCACCCATCG
CGAGGTCGGTGTAGATAGCCATTCTTGGCATAATGCCTTAAAAAATACCTTGCGTCAGGCACCCGATGTGATTCTGATTG
GTGAAATCCGGGATACGGAAACCATGGAACATGCAATTGCCTTTGCCGAAACAGGGCATCTCTGTCTGGGGACGCTGCAT
TCCAACAATGCCAACCAGACGCTTGACCGGATTATTAACTTCTTCCCGGAAGAACGCCGTAATCAGTTATTGATGGATCT
GTCTTCTAATATGAAAGCGATTGTCTCTCAGCGTTTGGTCCGTACTGAAGATGGCAAGGGACGTCGTGCCGCAGTCGAAA
TTATGCTAAATACACCATTGGTGTCGGATCTGATTCTGAAAGGTGATTTCCATGAATTAAAAGCAATTATGGGTAAATCA
CGCGAACTTGGCATGCAGACTTTTGATCAGGCATTATTTGATCTTTATAATGAAGGTGCGATTTCTTATGAAGAAGCATT
GCGTAATGCTGATTCGACCAATGAACTTCGTCTGCAAATCAAACTGAAAAGTACGCGTGCTAATCCAGCCATGAATAATA
CGGCCACCGCATTTAGCATGATGGAAGAGAAAAAGCCGGATAATGAAACGGATGAAGATGCCAGTAGTACAGAACAAAGC
TCATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	61.207	86.783	0.531
pilU	Acinetobacter baylyi ADP1	54.19	89.277	0.484
pilU	Vibrio cholerae strain A1552	50.986	88.529	0.451