Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   NMBH4476_RS07250 Genome accession   NC_017516
Coordinates   1390661..1391281 (-) Length   206 a.a.
NCBI ID   WP_002225360.1    Uniprot ID   -
Organism   Neisseria meningitidis H44/76     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1385661..1396281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBH4476_RS07220 (NMBH4476_1281) dut 1386188..1386640 (-) 453 WP_002225353.1 dUTP diphosphatase -
  NMBH4476_RS07225 (NMBH4476_1282) - 1386840..1387208 (+) 369 Protein_1327 AzlC family ABC transporter permease -
  NMBH4476_RS07235 (NMBH4476_1283) pilX 1388673..1389146 (-) 474 WP_002225356.1 PilX family type IV pilin Machinery gene
  NMBH4476_RS07240 (NMBH4476_1284) pilK 1389151..1389744 (-) 594 WP_002244085.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  NMBH4476_RS07245 (NMBH4476_1285) pilJ 1389723..1390664 (-) 942 WP_033911581.1 PilW family protein Machinery gene
  NMBH4476_RS07250 (NMBH4476_1286) pilV 1390661..1391281 (-) 621 WP_002225360.1 type IV pilus modification protein PilV Regulator
  NMBH4476_RS07255 (NMBH4476_1287) pilH 1391305..1391973 (-) 669 WP_002230433.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  NMBH4476_RS07260 (NMBH4476_1288) dnaB 1392282..1393688 (-) 1407 WP_002225362.1 replicative DNA helicase -
  NMBH4476_RS07265 (NMBH4476_1289) - 1393852..1394439 (+) 588 WP_002220670.1 superoxide dismutase -
  NMBH4476_RS07270 (NMBH4476_1290) - 1394956..1395465 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  NMBH4476_RS07275 (NMBH4476_1291) - 1395797..1396129 (-) 333 WP_002225363.1 hypothetical protein -
  NMBH4476_RS15855 - 1396174..1396281 (-) 108 Protein_1337 IS5/IS1182 family transposase -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 22325.27 Da        Isoelectric Point: 4.9868

>NTDB_id=38976 NMBH4476_RS07250 WP_002225360.1 1390661..1391281(-) (pilV) [Neisseria meningitidis H44/76]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHTLPHTLSAVDGDFAIDAMKTKGQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDN
KANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 621 bp        

>NTDB_id=38976 NMBH4476_RS07250 WP_002225360.1 1390661..1391281(-) (pilV) [Neisseria meningitidis H44/76]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATACACTACCGCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATGAA
AACTAAGGGGCAATTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAAT
AAGGCAAACGGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCT
TGAGGTGAGCGGCGACAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

98.544

100

0.985
  pilV/pilI Neisseria gonorrhoeae MS11

83.01

100

0.83

Multiple sequence alignment