Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FR932_RS18815 | Genome accession | NZ_CP044399 |
| Coordinates | 4169879..4170511 (+) | Length | 210 a.a. |
| NCBI ID | WP_019440675.1 | Uniprot ID | A0A5J6WRZ9 |
| Organism | Moritella marina ATCC 15381 strain MP-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4164879..4175511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR932_RS18800 (FR932_18805) | - | 4164965..4167127 (-) | 2163 | WP_081588312.1 | polysaccharide biosynthesis tyrosine autokinase | - |
| FR932_RS18805 (FR932_18810) | - | 4167357..4167995 (-) | 639 | WP_019440673.1 | LuxR C-terminal-related transcriptional regulator | - |
| FR932_RS18810 (FR932_18815) | - | 4168504..4169877 (+) | 1374 | WP_019440674.1 | MFS transporter | - |
| FR932_RS18815 (FR932_18820) | ssb | 4169879..4170511 (+) | 633 | WP_019440675.1 | single-stranded DNA-binding protein | Machinery gene |
| FR932_RS18820 (FR932_18825) | - | 4170674..4172050 (+) | 1377 | WP_019440676.1 | site-specific integrase | - |
| FR932_RS18825 (FR932_18830) | - | 4172068..4173615 (+) | 1548 | WP_019440677.1 | site-specific integrase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23017.05 Da Isoelectric Point: 4.9269
>NTDB_id=389757 FR932_RS18815 WP_019440675.1 4169879..4170511(+) (ssb) [Moritella marina ATCC 15381 strain MP-1]
MASRGVNKVIILGNLGNDPEIRSFPNGGAVANLTIATSESWRDKQTGEQREKTEWHRVAVFGKLAEIAGEYLRKGSQVYI
EGALQTRKWQDQNGQDRYTTEVVVQGFNGVMQMIGARQGGQQQQQQGGGGYNQQPQQQNQNAGWGQPQQPAAAPQQQQGG
YNQQPQQAPQQQAPQQQSYAPQQQAPAAAPQAPQQGFNEPSADFDDDIPF
MASRGVNKVIILGNLGNDPEIRSFPNGGAVANLTIATSESWRDKQTGEQREKTEWHRVAVFGKLAEIAGEYLRKGSQVYI
EGALQTRKWQDQNGQDRYTTEVVVQGFNGVMQMIGARQGGQQQQQQGGGGYNQQPQQQNQNAGWGQPQQPAAAPQQQQGG
YNQQPQQAPQQQAPQQQSYAPQQQAPAAAPQAPQQGFNEPSADFDDDIPF
Nucleotide
Download Length: 633 bp
>NTDB_id=389757 FR932_RS18815 WP_019440675.1 4169879..4170511(+) (ssb) [Moritella marina ATCC 15381 strain MP-1]
ATGGCCAGTCGTGGCGTAAATAAAGTAATTATTCTTGGTAATTTAGGTAATGATCCTGAAATCCGCTCATTCCCAAATGG
TGGCGCGGTTGCCAATCTAACGATTGCGACAAGTGAATCGTGGCGTGACAAGCAAACTGGCGAACAGCGTGAAAAAACTG
AATGGCACCGTGTTGCTGTATTCGGTAAACTAGCAGAAATTGCTGGTGAATATTTACGTAAAGGTTCACAGGTATATATC
GAAGGCGCATTACAAACACGTAAATGGCAAGATCAAAATGGCCAGGACCGTTACACTACAGAAGTTGTAGTACAAGGTTT
TAATGGTGTAATGCAGATGATTGGTGCTCGTCAAGGCGGTCAACAACAGCAGCAACAAGGTGGCGGTGGTTACAATCAAC
AACCACAACAGCAAAATCAAAATGCAGGTTGGGGTCAGCCACAACAACCAGCAGCTGCACCGCAACAACAGCAAGGCGGT
TATAATCAACAGCCACAGCAAGCACCACAGCAACAGGCTCCACAGCAGCAAAGCTATGCTCCACAACAGCAAGCACCTGC
AGCAGCGCCTCAAGCACCACAGCAAGGTTTTAACGAACCATCTGCTGACTTTGATGACGACATTCCGTTCTGA
ATGGCCAGTCGTGGCGTAAATAAAGTAATTATTCTTGGTAATTTAGGTAATGATCCTGAAATCCGCTCATTCCCAAATGG
TGGCGCGGTTGCCAATCTAACGATTGCGACAAGTGAATCGTGGCGTGACAAGCAAACTGGCGAACAGCGTGAAAAAACTG
AATGGCACCGTGTTGCTGTATTCGGTAAACTAGCAGAAATTGCTGGTGAATATTTACGTAAAGGTTCACAGGTATATATC
GAAGGCGCATTACAAACACGTAAATGGCAAGATCAAAATGGCCAGGACCGTTACACTACAGAAGTTGTAGTACAAGGTTT
TAATGGTGTAATGCAGATGATTGGTGCTCGTCAAGGCGGTCAACAACAGCAGCAACAAGGTGGCGGTGGTTACAATCAAC
AACCACAACAGCAAAATCAAAATGCAGGTTGGGGTCAGCCACAACAACCAGCAGCTGCACCGCAACAACAGCAAGGCGGT
TATAATCAACAGCCACAGCAAGCACCACAGCAACAGGCTCCACAGCAGCAAAGCTATGCTCCACAACAGCAAGCACCTGC
AGCAGCGCCTCAAGCACCACAGCAAGGTTTTAACGAACCATCTGCTGACTTTGATGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
63.208 |
100 |
0.638 |
| ssb | Glaesserella parasuis strain SC1401 |
50.971 |
98.095 |
0.5 |
| ssb | Neisseria gonorrhoeae MS11 |
41.546 |
98.571 |
0.41 |
| ssb | Neisseria meningitidis MC58 |
41.262 |
98.095 |
0.405 |