Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | F5I99_RS09995 | Genome accession | NZ_CP044222 |
| Coordinates | 2169738..2171141 (-) | Length | 467 a.a. |
| NCBI ID | WP_151055606.1 | Uniprot ID | A0A5J6LE68 |
| Organism | Nitrincola iocasae strain KXZD1103 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2164738..2176141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F5I99_RS09980 (F5I99_09980) | - | 2164977..2166311 (-) | 1335 | WP_225307368.1 | AmpG family muropeptide MFS transporter | - |
| F5I99_RS09985 (F5I99_09985) | ppsA | 2166367..2168700 (-) | 2334 | WP_407670354.1 | phosphoenolpyruvate synthase | - |
| F5I99_RS09990 (F5I99_09990) | - | 2168910..2169728 (+) | 819 | WP_151059086.1 | pyruvate, water dikinase regulatory protein | - |
| F5I99_RS09995 (F5I99_09995) | pilR | 2169738..2171141 (-) | 1404 | WP_151055606.1 | sigma-54 dependent transcriptional regulator | Regulator |
| F5I99_RS10000 (F5I99_10000) | - | 2171141..2172742 (-) | 1602 | WP_151055608.1 | nitrogen regulation protein NR(II) | - |
| F5I99_RS10005 (F5I99_10005) | pilB | 2172906..2174624 (+) | 1719 | WP_225307369.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| F5I99_RS10010 (F5I99_10010) | pilC | 2174642..2175874 (+) | 1233 | WP_151055610.1 | type II secretion system F family protein | Machinery gene |
Sequence
Protein
Download Length: 467 a.a. Molecular weight: 52156.88 Da Isoelectric Point: 6.2476
>NTDB_id=388890 F5I99_RS09995 WP_151055606.1 2169738..2171141(-) (pilR) [Nitrincola iocasae strain KXZD1103]
MKSVSATDRSRVVQPRVLVVDDEPDIRELIRLTLTRMQVDCLEAATLAEALQLLDQQGQGRIQLCLTDMRLPDGNGMDLI
YRIQKYYSHIPVAMITAHGNMSSAIEALKAGAFDFLNKPVELQTLRNLVTSAVRLEKQQQIAPGCDPGPELMGQSRAIEK
IRALVVRLSRSLAPVHISGESGTGKELVARMLHHRSHRCDKPFIAVNCGAIPADLMESEFFGHRKGSFTGATQHKEGLFQ
AAEGGTLFLDEVADLPLDMQVKLLRAIQEKSVRPVGAQKEEFVDVRIVSATHEDLAAKVESGEFREDLYYRINVIELRVP
PLREHAEDIPYLAAYFLQQLATEMGRSAPRLSAEAQERLCRHRFPGNVRELENVLARAITLNEGDLIEIEDIQLDNRSQS
ACDEATAGANGLQKVCSMGLEAYLELVERQILQEALEATHFNKTAAARKLGITFRTLRYRLKKLEMD
MKSVSATDRSRVVQPRVLVVDDEPDIRELIRLTLTRMQVDCLEAATLAEALQLLDQQGQGRIQLCLTDMRLPDGNGMDLI
YRIQKYYSHIPVAMITAHGNMSSAIEALKAGAFDFLNKPVELQTLRNLVTSAVRLEKQQQIAPGCDPGPELMGQSRAIEK
IRALVVRLSRSLAPVHISGESGTGKELVARMLHHRSHRCDKPFIAVNCGAIPADLMESEFFGHRKGSFTGATQHKEGLFQ
AAEGGTLFLDEVADLPLDMQVKLLRAIQEKSVRPVGAQKEEFVDVRIVSATHEDLAAKVESGEFREDLYYRINVIELRVP
PLREHAEDIPYLAAYFLQQLATEMGRSAPRLSAEAQERLCRHRFPGNVRELENVLARAITLNEGDLIEIEDIQLDNRSQS
ACDEATAGANGLQKVCSMGLEAYLELVERQILQEALEATHFNKTAAARKLGITFRTLRYRLKKLEMD
Nucleotide
Download Length: 1404 bp
>NTDB_id=388890 F5I99_RS09995 WP_151055606.1 2169738..2171141(-) (pilR) [Nitrincola iocasae strain KXZD1103]
ATGAAAAGTGTAAGCGCTACTGACCGGTCTCGGGTTGTACAACCCAGAGTGCTGGTAGTGGATGATGAACCGGATATTCG
TGAGTTGATCCGACTGACCTTGACGCGAATGCAGGTAGATTGCCTGGAGGCGGCGACGCTGGCCGAAGCGTTACAATTGC
TGGATCAGCAGGGACAGGGGAGGATTCAACTCTGTCTGACTGATATGCGTCTGCCCGATGGTAACGGTATGGATCTGATC
TATCGCATCCAAAAATACTACTCACACATTCCTGTCGCGATGATTACGGCGCATGGCAATATGAGTAGTGCCATTGAGGC
ACTCAAAGCCGGTGCTTTTGATTTTCTGAACAAGCCTGTTGAGTTGCAGACGTTACGTAATCTGGTTACGTCTGCTGTTA
GATTGGAAAAACAACAGCAAATCGCTCCTGGATGTGACCCAGGACCTGAATTGATGGGGCAGTCACGTGCGATTGAAAAA
ATACGTGCTCTGGTTGTCCGCCTTTCACGCAGCCTGGCCCCCGTGCATATTTCGGGCGAGTCGGGCACAGGTAAAGAGCT
GGTTGCTCGTATGTTGCACCATCGCAGTCACCGTTGTGACAAACCCTTTATTGCTGTGAACTGTGGAGCTATTCCGGCTG
ATCTGATGGAAAGTGAATTTTTTGGTCATCGTAAAGGTAGCTTTACTGGTGCAACTCAACATAAAGAGGGGCTGTTTCAG
GCGGCGGAGGGGGGAACACTTTTCCTTGACGAGGTGGCTGACTTACCTCTGGATATGCAAGTGAAGCTGCTGCGTGCTAT
TCAGGAAAAATCAGTCAGGCCGGTTGGGGCACAAAAAGAAGAGTTTGTTGATGTGCGTATTGTTAGTGCAACTCATGAAG
ACTTGGCCGCGAAAGTGGAGTCAGGCGAGTTTCGTGAAGACCTCTACTACCGTATCAATGTGATTGAGCTACGGGTGCCG
CCACTGCGGGAGCATGCCGAGGATATCCCTTATCTGGCTGCGTATTTTCTGCAGCAGCTGGCTACAGAGATGGGGCGTTC
GGCCCCACGTTTGTCGGCCGAGGCGCAAGAACGCCTGTGTCGGCATCGTTTTCCCGGTAATGTACGCGAGTTGGAAAATG
TGCTGGCACGTGCGATTACCCTCAATGAAGGTGATCTGATAGAAATTGAGGATATTCAGCTCGATAATCGCAGCCAGTCA
GCCTGTGACGAGGCGACAGCAGGCGCAAATGGATTGCAAAAAGTGTGTAGTATGGGGCTGGAGGCTTATCTGGAGCTGGT
CGAAAGACAGATCCTTCAGGAGGCCCTGGAAGCCACTCATTTCAACAAAACAGCCGCTGCCCGAAAGCTGGGTATCACCT
TTCGAACCCTGCGCTATCGGCTTAAAAAGCTTGAAATGGACTAG
ATGAAAAGTGTAAGCGCTACTGACCGGTCTCGGGTTGTACAACCCAGAGTGCTGGTAGTGGATGATGAACCGGATATTCG
TGAGTTGATCCGACTGACCTTGACGCGAATGCAGGTAGATTGCCTGGAGGCGGCGACGCTGGCCGAAGCGTTACAATTGC
TGGATCAGCAGGGACAGGGGAGGATTCAACTCTGTCTGACTGATATGCGTCTGCCCGATGGTAACGGTATGGATCTGATC
TATCGCATCCAAAAATACTACTCACACATTCCTGTCGCGATGATTACGGCGCATGGCAATATGAGTAGTGCCATTGAGGC
ACTCAAAGCCGGTGCTTTTGATTTTCTGAACAAGCCTGTTGAGTTGCAGACGTTACGTAATCTGGTTACGTCTGCTGTTA
GATTGGAAAAACAACAGCAAATCGCTCCTGGATGTGACCCAGGACCTGAATTGATGGGGCAGTCACGTGCGATTGAAAAA
ATACGTGCTCTGGTTGTCCGCCTTTCACGCAGCCTGGCCCCCGTGCATATTTCGGGCGAGTCGGGCACAGGTAAAGAGCT
GGTTGCTCGTATGTTGCACCATCGCAGTCACCGTTGTGACAAACCCTTTATTGCTGTGAACTGTGGAGCTATTCCGGCTG
ATCTGATGGAAAGTGAATTTTTTGGTCATCGTAAAGGTAGCTTTACTGGTGCAACTCAACATAAAGAGGGGCTGTTTCAG
GCGGCGGAGGGGGGAACACTTTTCCTTGACGAGGTGGCTGACTTACCTCTGGATATGCAAGTGAAGCTGCTGCGTGCTAT
TCAGGAAAAATCAGTCAGGCCGGTTGGGGCACAAAAAGAAGAGTTTGTTGATGTGCGTATTGTTAGTGCAACTCATGAAG
ACTTGGCCGCGAAAGTGGAGTCAGGCGAGTTTCGTGAAGACCTCTACTACCGTATCAATGTGATTGAGCTACGGGTGCCG
CCACTGCGGGAGCATGCCGAGGATATCCCTTATCTGGCTGCGTATTTTCTGCAGCAGCTGGCTACAGAGATGGGGCGTTC
GGCCCCACGTTTGTCGGCCGAGGCGCAAGAACGCCTGTGTCGGCATCGTTTTCCCGGTAATGTACGCGAGTTGGAAAATG
TGCTGGCACGTGCGATTACCCTCAATGAAGGTGATCTGATAGAAATTGAGGATATTCAGCTCGATAATCGCAGCCAGTCA
GCCTGTGACGAGGCGACAGCAGGCGCAAATGGATTGCAAAAAGTGTGTAGTATGGGGCTGGAGGCTTATCTGGAGCTGGT
CGAAAGACAGATCCTTCAGGAGGCCCTGGAAGCCACTCATTTCAACAAAACAGCCGCTGCCCGAAAGCTGGGTATCACCT
TTCGAACCCTGCGCTATCGGCTTAAAAAGCTTGAAATGGACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
57.582 |
97.43 |
0.561 |
| pilR | Acinetobacter baumannii strain A118 |
48.172 |
99.572 |
0.48 |
| luxO | Vibrio cholerae strain A1552 |
39.207 |
97.216 |
0.381 |