Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOB54_RS21620 | Genome accession | NZ_CP044097 |
| Coordinates | 4555989..4556525 (+) | Length | 178 a.a. |
| NCBI ID | WP_047459655.1 | Uniprot ID | A0AAW7F306 |
| Organism | Citrobacter koseri strain FDAARGOS_646 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4550989..4561525
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB54_RS21600 (FOB54_21605) | aphA | 4551548..4552261 (+) | 714 | WP_012134616.1 | acid phosphatase AphA | - |
| FOB54_RS21605 (FOB54_21610) | - | 4552464..4552820 (+) | 357 | WP_012134615.1 | MmcQ/YjbR family DNA-binding protein | - |
| FOB54_RS21610 (FOB54_21615) | uvrA | 4552916..4555738 (-) | 2823 | WP_012134614.1 | excinuclease ABC subunit UvrA | - |
| FOB54_RS21620 (FOB54_21625) | ssb | 4555989..4556525 (+) | 537 | WP_047459655.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| FOB54_RS21625 (FOB54_21630) | - | 4556787..4557218 (+) | 432 | WP_012134612.1 | universal stress protein | - |
| FOB54_RS21630 (FOB54_21635) | - | 4557328..4560045 (-) | 2718 | WP_371417114.1 | cation-transporting P-type ATPase | - |
| FOB54_RS21635 (FOB54_21640) | fecE | 4560501..4561268 (-) | 768 | WP_112001355.1 | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19110.13 Da Isoelectric Point: 5.2358
>NTDB_id=387796 FOB54_RS21620 WP_047459655.1 4555989..4556525(+) (ssb) [Citrobacter koseri strain FDAARGOS_646]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGQDKYTTEVVVNVGGTMQMLGGRQGGGAPAGGNMGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQS
APAPSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGQDKYTTEVVVNVGGTMQMLGGRQGGGAPAGGNMGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQS
APAPSNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=387796 FOB54_RS21620 WP_047459655.1 4555989..4556525(+) (ssb) [Citrobacter koseri strain FDAARGOS_646]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCAAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAGCAGACCGGTGAGATGAAAGAGCAGACGG
AATGGCACCGCGTTGTGCTGTTCGGCAAACTGGCGGAAGTGGCCAGCGAATATCTGCGTAAAGGTTCTCAGGTTTACATT
GAAGGTCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGTCAGGACAAATACACCACTGAAGTGGTGGTCAACGTTGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGCGGCGCTCCGGCTGGCGGCAATATGGGCGGCGGTCAGCAGCAGG
GCGGTTGGGGTCAGCCTCAGCAACCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCCCGTCCGCAGCAACAATCC
GCTCCGGCACCGTCTAACGAACCGCCAATGGATTTCGACGACGACATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCAAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAGCAGACCGGTGAGATGAAAGAGCAGACGG
AATGGCACCGCGTTGTGCTGTTCGGCAAACTGGCGGAAGTGGCCAGCGAATATCTGCGTAAAGGTTCTCAGGTTTACATT
GAAGGTCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGTCAGGACAAATACACCACTGAAGTGGTGGTCAACGTTGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGCGGCGCTCCGGCTGGCGGCAATATGGGCGGCGGTCAGCAGCAGG
GCGGTTGGGGTCAGCCTCAGCAACCGCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCCCGTCCGCAGCAACAATCC
GCTCCGGCACCGTCTAACGAACCGCCAATGGATTTCGACGACGACATCCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
57.923 |
100 |
0.596 |
| ssb | Neisseria meningitidis MC58 |
46.111 |
100 |
0.466 |
| ssb | Neisseria gonorrhoeae MS11 |
46.111 |
100 |
0.466 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
36.667 |
100 |
0.371 |