Detailed information NTG0387743

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: FOB76_RS03665
• Genome accession: NZ_CP044093
• Coordinates: 702870..703304 (-)
• Length: 144 a.a.
• NCBI ID: WP_002987783.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain FDAARGOS_668
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 697870..708304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB76_RS03640 (FOB76_03640)	proC	698906..699676 (+)	771	WP_002986527.1	pyrroline-5-carboxylate reductase	-
FOB76_RS03645 (FOB76_03645)	-	699759..700067 (-)	309	WP_032461811.1	hypothetical protein	-
FOB76_RS03650 (FOB76_03650)	-	700254..701450 (-)	1197	WP_123949427.1	acetate kinase	-
FOB76_RS03655 (FOB76_03655)	comYH	701509..702462 (-)	954	WP_002987790.1	class I SAM-dependent methyltransferase	Machinery gene
FOB76_RS03660 (FOB76_03660)	comGG	702560..702886 (-)	327	WP_002987787.1	competence type IV pilus minor pilin ComGG	-
FOB76_RS03665 (FOB76_03665)	comYF	702870..703304 (-)	435	WP_002987783.1	competence type IV pilus minor pilin ComGF	Machinery gene
FOB76_RS03670 (FOB76_03670)	comGE	703297..703581 (-)	285	WP_002987779.1	competence type IV pilus minor pilin ComGE	-
FOB76_RS03675 (FOB76_03675)	comGD	703538..703966 (-)	429	WP_002986548.1	competence type IV pilus minor pilin ComGD	-
FOB76_RS03680 (FOB76_03680)	comYC	703941..704267 (-)	327	WP_002986552.1	competence type IV pilus major pilin ComGC	Machinery gene
FOB76_RS03685 (FOB76_03685)	comYB	704269..705303 (-)	1035	WP_223845212.1	competence type IV pilus assembly protein ComGB	Machinery gene
FOB76_RS03690 (FOB76_03690)	comYA	705239..706177 (-)	939	WP_002987773.1	competence type IV pilus ATPase ComGA	Machinery gene
FOB76_RS03695 (FOB76_03695)	-	706270..706635 (-)	366	WP_002986560.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16585.23 Da
• Isoelectric Point: 10.2064

>NTDB_id=387743 FOB76_RS03665 WP_002987783.1 702870..703304(-) (comYF) [Streptococcus pyogenes strain FDAARGOS_668]
MSKQLSNIKAFTLLEALIALLVISGSLLVYQGLTQTLLKRSHYLARHDQDNWLLFSHQLREELSGARFCKVADNKLYVEK
GKKVLAFGQFKSHDFRKSASNGKGYQPMLFGISRSHIHIEQSQICITLKWKSGLERTFYYAFQD

Nucleotide

• Length: 435 bp

>NTDB_id=387743 FOB76_RS03665 WP_002987783.1 702870..703304(-) (comYF) [Streptococcus pyogenes strain FDAARGOS_668]
TTGAGTAAACAATTAAGTAACATAAAAGCTTTTACCCTCCTAGAGGCGTTAATAGCCTTACTCGTGATATCAGGGTCTTT
ATTGGTTTATCAAGGTTTGACCCAAACCCTCCTTAAACGTAGCCATTACCTAGCCCGTCATGATCAAGACAATTGGCTCT
TATTTTCTCATCAATTGCGAGAGGAGTTAAGTGGAGCAAGATTTTGCAAAGTAGCTGATAATAAACTATACGTTGAAAAA
GGAAAGAAAGTACTAGCTTTTGGCCAATTTAAAAGTCATGATTTTCGAAAATCAGCTAGTAATGGAAAAGGATATCAACC
CATGTTATTTGGAATATCACGTAGTCATATTCACATAGAGCAGTCACAGATTTGCATTACTTTAAAGTGGAAAAGTGGGT
TAGAAAGGACTTTTTATTATGCCTTTCAAGACTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (41-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	51.079	96.528	0.493
comYF	Streptococcus mutans UA159	50.36	96.528	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	46.715	95.139	0.444
comGF/cglF	Streptococcus mitis NCTC 12261	44.776	93.056	0.417
comGF/cglF	Streptococcus pneumoniae Rx1	43.609	92.361	0.403
comGF/cglF	Streptococcus pneumoniae D39	43.609	92.361	0.403
comGF/cglF	Streptococcus pneumoniae R6	43.609	92.361	0.403
comGF/cglF	Streptococcus pneumoniae TIGR4	43.609	92.361	0.403
comGF/cglF	Streptococcus mitis SK321	42.857	92.361	0.396