Detailed information NTG0387575

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: FOB45_RS21840
• Genome accession: NZ_CP044086
• Coordinates: 3143318..3144382 (-)
• Length: 354 a.a.
• NCBI ID: WP_019363985.1
• Uniprot ID: -
• Organism: Pseudomonas luteola strain FDAARGOS_637
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3138318..3149382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB45_RS21815 (FOB45_21815)	aroK	3138930..3139448 (-)	519	WP_037030744.1	shikimate kinase AroK	-
FOB45_RS21820 (FOB45_21820)	pilQ	3139454..3141577 (-)	2124	WP_167517291.1	type IV pilus secretin PilQ	Machinery gene
FOB45_RS21825 (FOB45_21825)	pilP	3141590..3142114 (-)	525	WP_010797033.1	type 4a pilus biogenesis lipoprotein PilP	-
FOB45_RS21830 (FOB45_21830)	pilO	3142111..3142734 (-)	624	WP_010797032.1	type 4a pilus biogenesis protein PilO	-
FOB45_RS21835 (FOB45_21835)	-	3142731..3143318 (-)	588	WP_010797031.1	PilN domain-containing protein	-
FOB45_RS21840 (FOB45_21840)	comM	3143318..3144382 (-)	1065	WP_019363985.1	pilus assembly protein PilM	Machinery gene
FOB45_RS21845 (FOB45_21845)	-	3144564..3146990 (+)	2427	WP_019363984.1	penicillin-binding protein 1A	-
FOB45_RS21850 (FOB45_21850)	-	3147037..3148305 (-)	1269	WP_150348047.1	malic enzyme-like NAD(P)-binding protein	-
FOB45_RS21855 (FOB45_21855)	rpmE	3148821..3149039 (-)	219	WP_010797026.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37904.34 Da
• Isoelectric Point: 4.6190

>NTDB_id=387575 FOB45_RS21840 WP_019363985.1 3143318..3144382(-) (comM) [Pseudomonas luteola strain FDAARGOS_637]
MLGLFKKKTNTLLGIDISSTSVKLLELSRAGGRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALGRVLAKARTNARNAAV
AVAGSAVIAKTIEMDAGLSDDELENQIKLEADQYIPYPLEEVAIDFEVQGQSARNPGRVEVLLAACRKENVEVREAALAL
AGLSAKVIDVEAYALERAYTLMAGQLGGNVDELTVAIVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSI
EEAGLAKKQGGLPDDYQVEVLTPFRDAVVQQVARSLQFFFAAGQYNDVDYILLAGGTASISGLDRLIQQKIGTPTLVANP
FADMTLNSKVNASALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=387575 FOB45_RS21840 WP_019363985.1 3143318..3144382(-) (comM) [Pseudomonas luteola strain FDAARGOS_637]
GTGCTAGGGCTATTCAAAAAGAAGACGAATACGCTACTGGGAATCGATATCAGCTCAACGTCTGTCAAGTTGCTTGAGCT
GAGTCGTGCTGGTGGACGGTATAGGGTCGAAGCCTATGCCGTTGAGCCGTTGCCGCCGAACGCCGTGGTGGAAAAGAACA
TTGCCGAGCTTGAAGGCGTAGGGCAAGCGCTGGGCCGGGTTCTGGCCAAGGCTCGAACGAATGCTCGAAATGCAGCAGTG
GCGGTAGCGGGTTCGGCTGTTATTGCAAAGACCATCGAAATGGATGCGGGTCTTTCGGATGACGAGCTTGAAAACCAGAT
CAAGCTTGAGGCGGATCAGTATATTCCTTATCCCCTTGAGGAAGTGGCGATTGACTTCGAGGTTCAAGGCCAGTCGGCGC
GTAATCCAGGCCGTGTTGAAGTGCTCCTTGCGGCATGTCGCAAGGAGAACGTTGAAGTTCGTGAGGCCGCGTTAGCGTTG
GCCGGGCTTTCCGCCAAGGTTATTGATGTAGAAGCTTATGCTCTTGAGCGTGCTTATACGCTAATGGCCGGGCAGCTAGG
CGGTAATGTCGATGAATTGACGGTTGCGATTGTTGATATTGGCGCCACGATGACTACCCTTAGCGTTCTGCATAATGGCC
GTACCATTTATACGCGCGAGCAGCTCTTTGGCGGACGGCAGCTGACCGAAGAAATCCAGCGTCGTTACGGACTCTCCATC
GAGGAAGCCGGTCTTGCCAAAAAGCAGGGTGGACTGCCTGATGATTATCAGGTCGAAGTATTGACCCCCTTCCGGGATGC
GGTTGTCCAGCAGGTTGCCCGCTCACTGCAATTCTTCTTTGCAGCCGGACAATACAATGATGTGGACTATATCTTGCTTG
CGGGAGGAACCGCGTCAATTTCCGGCCTGGATCGGCTGATCCAACAGAAAATTGGCACTCCGACCCTAGTTGCTAATCCG
TTTGCTGATATGACGCTAAATAGCAAAGTCAATGCAAGTGCTCTGGCCAGCGACGCTCCGGCGCTCATGATTGCCTGCGG
TCTGGCTATGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	58.427	100	0.588
pilM	Acinetobacter baumannii D1279779	58.146	100	0.585
comM	Acinetobacter baylyi ADP1	55.65	100	0.557
pilM	Legionella pneumophila strain ERS1305867	45.48	100	0.455