Detailed information NTG0387475

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: FOB65_RS23175
• Genome accession: NZ_CP044074
• Coordinates: 4682335..4683399 (+)
• Length: 354 a.a.
• NCBI ID: WP_027598915.1
• Uniprot ID: -
• Organism: Pseudomonas oryzihabitans strain FDAARGOS_657
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4677335..4688399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB65_RS23160 (FOB65_23160)	-	4677488..4678312 (+)	825	WP_223855406.1	thermonuclease family protein	-
FOB65_RS23165 (FOB65_23165)	-	4678425..4679693 (+)	1269	WP_007161620.1	malic enzyme-like NAD(P)-binding protein	-
FOB65_RS23170 (FOB65_23170)	-	4679747..4682167 (-)	2421	WP_150340609.1	penicillin-binding protein 1A	-
FOB65_RS23175 (FOB65_23175)	pilM	4682335..4683399 (+)	1065	WP_027598915.1	pilus assembly protein PilM	Machinery gene
FOB65_RS23180 (FOB65_23180)	-	4683400..4683990 (+)	591	WP_108582365.1	PilN domain-containing protein	-
FOB65_RS23185 (FOB65_23185)	pilO	4683987..4684640 (+)	654	WP_007161624.1	type 4a pilus biogenesis protein PilO	-
FOB65_RS23190 (FOB65_23190)	-	4684637..4685155 (+)	519	WP_027602907.1	pilus assembly protein PilP	-
FOB65_RS23195 (FOB65_23195)	pilQ	4685156..4687405 (+)	2250	WP_081875221.1	type IV pilus secretin PilQ	Machinery gene
FOB65_RS23200 (FOB65_23200)	aroK	4687411..4687929 (+)	519	WP_007161627.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37811.20 Da
• Isoelectric Point: 4.6278

>NTDB_id=387475 FOB65_RS23175 WP_027598915.1 4682335..4683399(+) (pilM) [Pseudomonas oryzihabitans strain FDAARGOS_657]
MLGLFRKKANTLLGIDVSSTSVKLIELSRAGGRYRVEAYAVEPLPANAVVEKNIAELEGVGLAIGRVLVKARTSARSAAV
AVSGSAVIAKTIEMDAGLTDDELENQIKLEADQYIPYPLDEVAIDFEVQGPSPRNAERVEVLLAACRKENVEVREAALAL
AGVSAKVVDVEAYALERAYQLLANQLGGHVDDLTVAVVDIGATMTTLSVLHNGKTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYQSEVLTPFREAVVQQVARSLQFFFAAGQYNDVDYILLAGGTASISGLDRLIQQKIGTPTVLANP
FADMTVSNKVNAAALAGDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=387475 FOB65_RS23175 WP_027598915.1 4682335..4683399(+) (pilM) [Pseudomonas oryzihabitans strain FDAARGOS_657]
GTGCTAGGGCTATTCAGAAAGAAGGCGAATACGCTGCTGGGTATCGACGTCAGTTCGACATCCGTGAAACTCATCGAGTT
GAGCCGTGCAGGCGGGCGCTATCGGGTGGAGGCCTATGCGGTCGAACCCCTGCCGGCCAATGCCGTGGTCGAGAAGAACA
TCGCCGAACTCGAAGGCGTGGGCCTGGCCATCGGCCGGGTGCTGGTCAAGGCGCGCACCTCCGCGCGCAGCGCTGCCGTG
GCCGTCTCCGGCTCGGCGGTGATCGCCAAGACCATCGAGATGGACGCCGGTCTGACCGACGACGAGCTGGAAAACCAGAT
CAAGCTGGAAGCCGACCAGTACATTCCCTATCCGCTGGACGAGGTCGCCATCGATTTCGAGGTGCAGGGGCCGTCGCCGC
GCAACGCCGAGCGCGTCGAGGTGCTGCTGGCCGCCTGCCGGAAGGAAAACGTCGAGGTCCGCGAAGCGGCCCTGGCGCTG
GCCGGCGTCTCGGCCAAGGTGGTCGACGTCGAGGCCTATGCCCTGGAGCGCGCCTATCAGCTGCTGGCCAATCAGCTCGG
TGGCCACGTCGACGACCTGACCGTGGCGGTGGTCGACATCGGCGCCACCATGACCACCCTGAGCGTGCTGCACAACGGCA
AGACCATCTATACCCGCGAACAGCTGTTTGGCGGTCGCCAGCTCACCGAAGAGATCCAGCGTCGCTATGGCCTGTCGGTG
GAAGAGGCCGGTCTGGCCAAGAAGCAGGGCGGGCTGCCGGACGACTACCAGAGCGAGGTGCTGACGCCCTTCCGCGAGGC
GGTGGTGCAACAGGTGGCGCGTTCGCTGCAGTTCTTTTTCGCCGCCGGGCAATACAATGATGTGGACTACATCTTGCTTG
CTGGAGGAACCGCGTCAATTTCCGGACTCGACCGCTTGATCCAGCAGAAAATCGGCACCCCCACGGTCCTGGCCAATCCC
TTCGCCGACATGACCGTCAGCAACAAGGTCAACGCGGCGGCCCTGGCGGGTGACGCCCCGGCGCTGATGATCGCCTGCGG
CCTGGCCATGAGGAGTTTCGACTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.78	100	0.568
comM	Acinetobacter nosocomialis M2	56.78	100	0.568
comM	Acinetobacter baylyi ADP1	55.367	100	0.554
pilM	Legionella pneumophila strain ERS1305867	44.633	100	0.446