Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   F3P16_RS17800 Genome accession   NZ_CP043953
Coordinates   3776891..3778021 (+) Length   376 a.a.
NCBI ID   WP_049590070.1    Uniprot ID   A0A7X5LV61
Organism   Acinetobacter baumannii strain K09-14     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3771891..3783021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3P16_RS17775 (F3P16_17775) - 3772151..3772357 (-) 207 WP_000182542.1 hypothetical protein -
  F3P16_RS17780 (F3P16_17780) - 3772411..3774525 (-) 2115 WP_071243797.1 TonB-dependent copper receptor -
  F3P16_RS17785 (F3P16_17785) - 3774598..3775026 (-) 429 WP_000231981.1 DUF2946 family protein -
  F3P16_RS17790 (F3P16_17790) def 3775063..3775593 (-) 531 WP_001196539.1 peptide deformylase -
  F3P16_RS17795 (F3P16_17795) tsaP 3775716..3776870 (+) 1155 WP_049590038.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  F3P16_RS17800 (F3P16_17800) dprA 3776891..3778021 (+) 1131 WP_049590070.1 DNA-processing protein DprA Machinery gene
  F3P16_RS17805 (F3P16_17805) - 3778072..3778641 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  F3P16_RS17810 (F3P16_17810) - 3779033..3779953 (-) 921 WP_000084546.1 DMT family transporter -
  F3P16_RS17815 (F3P16_17815) - 3780059..3780709 (-) 651 WP_086222322.1 TetR/AcrR family transcriptional regulator -
  F3P16_RS17820 (F3P16_17820) - 3780846..3782060 (+) 1215 WP_150205253.1 MFS transporter -
  F3P16_RS17825 (F3P16_17825) - 3782082..3782846 (+) 765 WP_000786954.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41944.46 Da        Isoelectric Point: 6.5815

>NTDB_id=386804 F3P16_RS17800 WP_049590070.1 3776891..3778021(+) (dprA) [Acinetobacter baumannii strain K09-14]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
RQHTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEETNTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=386804 F3P16_RS17800 WP_049590070.1 3776891..3778021(+) (dprA) [Acinetobacter baumannii strain K09-14]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTTAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAGGTCAGGCGCAGTTTGAACAACTTGTACAACAAGTT
CGTCAGCATACGGATTTTATTTTAACGCCAGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCACCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCCTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTAGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CACCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCCACTCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAACTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7X5LV61

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

99.468

100

0.995

  dprA Acinetobacter baumannii D1279779

98.67

100

0.987

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715

  dprA Vibrio cholerae strain A1552

43.505

88.032

0.383


Multiple sequence alignment