Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   F3P16_RS17795 Genome accession   NZ_CP043953
Coordinates   3775716..3776870 (+) Length   384 a.a.
NCBI ID   WP_049590038.1    Uniprot ID   A0A7X5LV58
Organism   Acinetobacter baumannii strain K09-14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3770716..3781870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3P16_RS17770 (F3P16_17770) - 3770862..3772094 (+) 1233 WP_049590041.1 oxygenase MpaB family protein -
  F3P16_RS17775 (F3P16_17775) - 3772151..3772357 (-) 207 WP_000182542.1 hypothetical protein -
  F3P16_RS17780 (F3P16_17780) - 3772411..3774525 (-) 2115 WP_071243797.1 TonB-dependent copper receptor -
  F3P16_RS17785 (F3P16_17785) - 3774598..3775026 (-) 429 WP_000231981.1 DUF2946 family protein -
  F3P16_RS17790 (F3P16_17790) def 3775063..3775593 (-) 531 WP_001196539.1 peptide deformylase -
  F3P16_RS17795 (F3P16_17795) tsaP 3775716..3776870 (+) 1155 WP_049590038.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  F3P16_RS17800 (F3P16_17800) dprA 3776891..3778021 (+) 1131 WP_049590070.1 DNA-processing protein DprA Machinery gene
  F3P16_RS17805 (F3P16_17805) - 3778072..3778641 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  F3P16_RS17810 (F3P16_17810) - 3779033..3779953 (-) 921 WP_000084546.1 DMT family transporter -
  F3P16_RS17815 (F3P16_17815) - 3780059..3780709 (-) 651 WP_086222322.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42464.45 Da        Isoelectric Point: 9.1098

>NTDB_id=386803 F3P16_RS17795 WP_049590038.1 3775716..3776870(+) (tsaP) [Acinetobacter baumannii strain K09-14]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVRATSPNHNPPSLKRNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTSQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVIGSIGRAAKNSVVTLDRGTTQGIQIGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=386803 F3P16_RS17795 WP_049590038.1 3775716..3776870(+) (tsaP) [Acinetobacter baumannii strain K09-14]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCGTGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGAAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCAAGCAACCAACATGTTAAAAATCCGCACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGTGACGGCTGTGTCGGTATTATCCGTCGCTATACAAGTCAAACCACAAACC
TGCAACCTCAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TAGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACCCAGGGCATTCAAATAGGCCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAGTTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7X5LV58

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.177

100

0.982


Multiple sequence alignment