Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NMAA_RS02305 Genome accession   NC_017512
Coordinates   462088..462369 (+) Length   93 a.a.
NCBI ID   WP_002245932.1    Uniprot ID   -
Organism   Neisseria meningitidis WUE 2594     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 457088..467369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMAA_RS02270 (NMAA_0362) - 457705..457977 (+) 273 WP_002238280.1 hypothetical protein -
  NMAA_RS15640 - 458058..458360 (+) 303 Protein_429 VENN motif pre-toxin domain-containing protein -
  NMAA_RS14955 - 458529..459149 (+) 621 WP_009345692.1 hypothetical protein -
  NMAA_RS02280 (NMAA_0363) - 459152..460087 (+) 936 WP_014580500.1 immunity 49 family protein -
  NMAA_RS14720 (NMAA_0364) - 460651..460854 (+) 204 WP_002261355.1 hypothetical protein -
  NMAA_RS02300 (NMAA_0366) - 461418..461876 (+) 459 WP_002214429.1 hypothetical protein -
  NMAA_RS13890 - 461875..462009 (+) 135 Protein_434 IS1595 family transposase -
  NMAA_RS02305 (NMAA_ps038) comA 462088..462369 (+) 282 WP_002245932.1 ATP-binding cassette domain-containing protein Regulator
  NMAA_RS02310 (NMAA_0367) - 462390..463616 (-) 1227 WP_002245933.1 YihY family inner membrane protein -
  NMAA_RS02315 (NMAA_ps039) - 463771..463975 (+) 205 Protein_437 NAD(P)H-quinone oxidoreductase -
  NMAA_RS02320 (NMAA_0368) queC 464160..464819 (+) 660 WP_002245934.1 7-cyano-7-deazaguanine synthase QueC -
  NMAA_RS02325 (NMAA_0369) - 464847..465365 (+) 519 WP_002243792.1 DUF1543 domain-containing protein -
  NMAA_RS02330 (NMAA_0370) queD 465372..465794 (+) 423 WP_002229103.1 6-carboxytetrahydropterin synthase QueD -
  NMAA_RS02335 (NMAA_0371) - 466063..466434 (+) 372 WP_002245935.1 DUF1304 domain-containing protein -
  NMAA_RS02340 (NMAA_0372) - 466431..467069 (+) 639 WP_002229101.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10144.82 Da        Isoelectric Point: 6.2138

>NTDB_id=38665 NMAA_RS02305 WP_002245932.1 462088..462369(+) (comA) [Neisseria meningitidis WUE 2594]
MIHEEICAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDEATSHLDIANEKAVNANLNGLSIIKIMAAHRK
ETVESADRKMSLG

Nucleotide


Download         Length: 282 bp        

>NTDB_id=38665 NMAA_RS02305 WP_002245932.1 462088..462369(+) (comA) [Neisseria meningitidis WUE 2594]
ATGATTCACGAAGAAATCTGCGCCATGCCTATGGGCTATGAAACCTTGATCGGCGATATGGGCAGCGCACTGTCAGGCGG
ACAAAAACAACGCATCGTATTGGCTCGTGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGAAGCGACCAGCCATT
TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATCATAAAAATTATGGCGGCACACAGAAAG
GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(15-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

46.154

97.849

0.452
  comA Streptococcus mitis NCTC 12261

45.055

97.849

0.441
  comA Streptococcus pneumoniae Rx1

45.055

97.849

0.441
  comA Streptococcus pneumoniae D39

45.055

97.849

0.441
  comA Streptococcus pneumoniae TIGR4

45.055

97.849

0.441
  comA Streptococcus pneumoniae R6

45.055

97.849

0.441
  comA/nlmT Streptococcus mutans UA159

47.126

93.548

0.441
  comA Streptococcus gordonii str. Challis substr. CH1

43.956

97.849

0.43

Multiple sequence alignment