Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F2A31_RS00880 | Genome accession | NZ_CP043909 |
| Coordinates | 188933..189502 (+) | Length | 189 a.a. |
| NCBI ID | WP_150024788.1 | Uniprot ID | A0A5P1UN57 |
| Organism | Acinetobacter suaedae strain C16S1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 183933..194502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F2A31_RS00855 (F2A31_00855) | - | 184115..184915 (-) | 801 | WP_150024784.1 | SDR family oxidoreductase | - |
| F2A31_RS00860 (F2A31_00860) | - | 185018..185389 (-) | 372 | WP_150024785.1 | MerR family transcriptional regulator | - |
| F2A31_RS00865 (F2A31_00865) | tenA | 185456..186130 (-) | 675 | WP_150024786.1 | thiaminase II | - |
| F2A31_RS00870 (F2A31_00870) | - | 186303..187385 (+) | 1083 | WP_113996552.1 | DUF475 domain-containing protein | - |
| F2A31_RS00875 (F2A31_00875) | - | 187517..188881 (+) | 1365 | WP_150024787.1 | MFS transporter | - |
| F2A31_RS00880 (F2A31_00880) | ssb | 188933..189502 (+) | 570 | WP_150024788.1 | single-stranded DNA-binding protein | Machinery gene |
| F2A31_RS00890 (F2A31_00890) | - | 189905..191338 (+) | 1434 | WP_150024790.1 | amino acid permease | - |
| F2A31_RS00895 (F2A31_00895) | - | 191395..192897 (-) | 1503 | WP_075314457.1 | PLP-dependent aminotransferase family protein | - |
| F2A31_RS00900 (F2A31_00900) | gabT | 193052..194344 (+) | 1293 | WP_150024791.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 20858.56 Da Isoelectric Point: 6.4820
>NTDB_id=386455 F2A31_RS00880 WP_150024788.1 188933..189502(+) (ssb) [Acinetobacter suaedae strain C16S1]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQGEQSGGDFNQPRFNNNQGGGYQNSNAQNQGGYGQNNGGFQQGNYAGS
PQAGNGFNSPKAPQPAATAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQGEQSGGDFNQPRFNNNQGGGYQNSNAQNQGGYGQNNGGFQQGNYAGS
PQAGNGFNSPKAPQPAATAPADLDDDLPF
Nucleotide
Download Length: 570 bp
>NTDB_id=386455 F2A31_RS00880 WP_150024788.1 188933..189502(+) (ssb) [Acinetobacter suaedae strain C16S1]
ATGCGTGGTGTGAATAAGGTTATTTTAGTCGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCGAATGGTGGCTC
GCTAACACAGTTCTCGATTGCAACAAGTGAATCGTGGACGGATAAAAATACAGGCGAACGTAAAGAGCAAACAGAGTGGC
ATCGTATTGTATTGCACAACCGTTTAGGTGAAATTGCACAGCAATACCTTCGTAAAGGTTCTAAGGTGTATATCGAAGGT
TCGTTACGTACCCGTCAGTGGACTGACCAAAATGGTCAAGAACGTTACAGCACTGAAATTCGTGGCGATCAGATGCAAAT
GCTTGATTCCCGTCAACAGGGTGAGCAAAGTGGTGGTGATTTCAATCAACCACGCTTTAACAATAATCAAGGCGGTGGTT
ACCAGAATTCTAATGCTCAAAACCAAGGCGGTTATGGCCAAAATAATGGTGGTTTCCAACAGGGTAATTATGCAGGTAGT
CCACAAGCTGGAAATGGTTTTAATTCACCTAAAGCACCACAGCCTGCTGCAACAGCACCTGCGGATTTAGATGATGATTT
ACCGTTCTAA
ATGCGTGGTGTGAATAAGGTTATTTTAGTCGGTACTTTGGGTCGTGATCCTGAAACAAAAACTTTTCCGAATGGTGGCTC
GCTAACACAGTTCTCGATTGCAACAAGTGAATCGTGGACGGATAAAAATACAGGCGAACGTAAAGAGCAAACAGAGTGGC
ATCGTATTGTATTGCACAACCGTTTAGGTGAAATTGCACAGCAATACCTTCGTAAAGGTTCTAAGGTGTATATCGAAGGT
TCGTTACGTACCCGTCAGTGGACTGACCAAAATGGTCAAGAACGTTACAGCACTGAAATTCGTGGCGATCAGATGCAAAT
GCTTGATTCCCGTCAACAGGGTGAGCAAAGTGGTGGTGATTTCAATCAACCACGCTTTAACAATAATCAAGGCGGTGGTT
ACCAGAATTCTAATGCTCAAAACCAAGGCGGTTATGGCCAAAATAATGGTGGTTTCCAACAGGGTAATTATGCAGGTAGT
CCACAAGCTGGAAATGGTTTTAATTCACCTAAAGCACCACAGCCTGCTGCAACAGCACCTGCGGATTTAGATGATGATTT
ACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
55.897 |
100 |
0.577 |
| ssb | Vibrio cholerae strain A1552 |
45.361 |
100 |
0.466 |
| ssb | Neisseria gonorrhoeae MS11 |
40.722 |
100 |
0.418 |
| ssb | Neisseria meningitidis MC58 |
40.206 |
100 |
0.413 |