Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   HG697_RS01050 Genome accession   NZ_CP051623
Coordinates   166490..166681 (+) Length   63 a.a.
NCBI ID   WP_003058494.1    Uniprot ID   A0ABU0A8E3
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 161490..171681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HG697_RS01020 (HG697_01025) - 161565..163430 (+) 1866 WP_170078897.1 DUF859 family phage minor structural protein -
  HG697_RS01025 (HG697_01030) - 163481..163909 (+) 429 WP_003058584.1 DUF1366 domain-containing protein -
  HG697_RS01030 (HG697_01035) - 163875..164102 (+) 228 WP_037588167.1 hypothetical protein -
  HG697_RS01035 (HG697_01040) - 164110..164577 (+) 468 WP_003058491.1 phage holin family protein -
  HG697_RS01040 (HG697_01045) - 164570..164905 (+) 336 WP_003058565.1 phage holin -
  HG697_RS01045 (HG697_01050) - 164907..166352 (+) 1446 WP_170078900.1 peptidoglycan amidohydrolase family protein -
  HG697_RS01050 (HG697_01055) prx 166490..166681 (+) 192 WP_003058494.1 hypothetical protein Regulator
  HG697_RS01055 (HG697_01060) comGD 166696..167088 (+) 393 WP_003058533.1 competence type IV pilus minor pilin ComGD Machinery gene
  HG697_RS01060 (HG697_01065) comGE 167096..167341 (+) 246 WP_003058569.1 competence type IV pilus minor pilin ComGE Machinery gene
  HG697_RS01065 (HG697_01070) comGF 167322..167762 (+) 441 WP_003058520.1 competence type IV pilus minor pilin ComGF Machinery gene
  HG697_RS01070 (HG697_01075) comGG 167785..168114 (+) 330 WP_003058539.1 competence type IV pilus minor pilin ComGG -
  HG697_RS01075 (HG697_01080) comGH 168177..169130 (+) 954 WP_003060701.1 class I SAM-dependent methyltransferase Machinery gene
  HG697_RS01080 (HG697_01085) - 169189..170385 (+) 1197 WP_015057203.1 acetate kinase -
  HG697_RS01085 (HG697_01090) - 170691..170897 (+) 207 WP_003058508.1 helix-turn-helix transcriptional regulator -
  HG697_RS01090 (HG697_01095) - 171000..171680 (+) 681 WP_012766451.1 type II CAAX endopeptidase family protein -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7322.36 Da        Isoelectric Point: 4.3455

>NTDB_id=385773 HG697_RS01050 WP_003058494.1 166490..166681(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
MNETLYIFLEGKAKGWFEDTVNVVRKNGKIFDFVLDGEKIQPHEVVSIEIFDDVIKEISSYLN

Nucleotide


Download         Length: 192 bp        

>NTDB_id=385773 HG697_RS01050 WP_003058494.1 166490..166681(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
ATGAATGAAACGCTGTATATCTTTTTAGAAGGAAAAGCTAAGGGGTGGTTTGAGGACACCGTGAATGTTGTTAGAAAGAA
TGGAAAGATATTTGATTTTGTATTAGATGGCGAGAAGATACAGCCTCATGAGGTGGTAAGTATTGAGATATTTGATGATG
TTATTAAAGAGATTTCTTCTTATTTAAACTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

45.283

84.127

0.381

  prx Streptococcus pyogenes MGAS315

57.5

63.492

0.365


Multiple sequence alignment