Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FY550_RS09755 | Genome accession | NZ_CP043420 |
| Coordinates | 2114009..2114293 (+) | Length | 94 a.a. |
| NCBI ID | WP_070977740.1 | Uniprot ID | A0A1S1NZA1 |
| Organism | Kushneria phosphatilytica strain YCWA18 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2109009..2119293
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FY550_RS09720 (FY550_09720) | - | 2109164..2110330 (+) | 1167 | WP_070977733.1 | FUSC family protein | - |
| FY550_RS09725 (FY550_09725) | - | 2110333..2110869 (-) | 537 | WP_168169299.1 | hypothetical protein | - |
| FY550_RS09730 (FY550_09730) | - | 2110829..2111104 (-) | 276 | WP_070977735.1 | succinate dehydrogenase assembly factor 2 | - |
| FY550_RS09735 (FY550_09735) | ihfB | 2111253..2111549 (+) | 297 | WP_070977736.1 | integration host factor subunit beta | - |
| FY550_RS09740 (FY550_09740) | - | 2111617..2111922 (+) | 306 | WP_070977737.1 | lipopolysaccharide assembly protein LapA domain-containing protein | - |
| FY550_RS09745 (FY550_09745) | lapB | 2111923..2113107 (+) | 1185 | WP_070977738.1 | lipopolysaccharide assembly protein LapB | - |
| FY550_RS09750 (FY550_09750) | pyrF | 2113126..2113845 (-) | 720 | WP_070977739.1 | orotidine-5'-phosphate decarboxylase | - |
| FY550_RS09755 (FY550_09755) | comEA | 2114009..2114293 (+) | 285 | WP_070977740.1 | ComEA family DNA-binding protein | Machinery gene |
| FY550_RS09760 (FY550_09760) | - | 2114453..2114968 (+) | 516 | WP_168169300.1 | FxsA family protein | - |
| FY550_RS09765 (FY550_09765) | - | 2115128..2115421 (+) | 294 | WP_070977742.1 | co-chaperone GroES | - |
| FY550_RS09770 (FY550_09770) | groL | 2115496..2117136 (+) | 1641 | WP_070977743.1 | chaperonin GroEL | - |
| FY550_RS09775 (FY550_09775) | - | 2117678..2118457 (+) | 780 | WP_070977744.1 | RNA methyltransferase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 9892.29 Da Isoelectric Point: 4.6028
>NTDB_id=383890 FY550_RS09755 WP_070977740.1 2114009..2114293(+) (comEA) [Kushneria phosphatilytica strain YCWA18]
MRKILAAIMTLVALGLMTPTALADDTSPASRVSVNINTATVEELASLPGIGEKKAADIIEDRKAHGEYDSVDSLTRVKGI
GEATVDGLRDRADI
MRKILAAIMTLVALGLMTPTALADDTSPASRVSVNINTATVEELASLPGIGEKKAADIIEDRKAHGEYDSVDSLTRVKGI
GEATVDGLRDRADI
Nucleotide
Download Length: 285 bp
>NTDB_id=383890 FY550_RS09755 WP_070977740.1 2114009..2114293(+) (comEA) [Kushneria phosphatilytica strain YCWA18]
ATGCGCAAGATTCTGGCTGCGATCATGACCCTTGTCGCGCTTGGACTGATGACCCCAACCGCACTGGCCGATGACACCTC
ACCGGCATCTCGGGTATCGGTCAATATCAATACCGCCACTGTCGAAGAGCTGGCCTCCCTGCCCGGCATCGGCGAGAAGA
AAGCAGCCGATATCATCGAGGATCGCAAGGCACACGGCGAATATGACAGCGTTGACAGCCTGACCCGTGTCAAGGGCATC
GGTGAAGCCACAGTCGATGGACTGCGCGACAGGGCCGATATCTGA
ATGCGCAAGATTCTGGCTGCGATCATGACCCTTGTCGCGCTTGGACTGATGACCCCAACCGCACTGGCCGATGACACCTC
ACCGGCATCTCGGGTATCGGTCAATATCAATACCGCCACTGTCGAAGAGCTGGCCTCCCTGCCCGGCATCGGCGAGAAGA
AAGCAGCCGATATCATCGAGGATCGCAAGGCACACGGCGAATATGACAGCGTTGACAGCCTGACCCGTGTCAAGGGCATC
GGTGAAGCCACAGTCGATGGACTGCGCGACAGGGCCGATATCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.5 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.652 |
97.872 |
0.447 |
| comEA | Vibrio campbellii strain DS40M4 |
43.82 |
94.681 |
0.415 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
34.862 |
100 |
0.404 |