Detailed information NTG0383544

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: FY406_RS00675
• Genome accession: NZ_CP043405
• Coordinates: 148946..151168 (-)
• Length: 740 a.a.
• NCBI ID: WP_003089219.1
• Uniprot ID: -
• Organism: Streptococcus ratti strain ATCC 31377
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 143946..156168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY406_RS00650 (FY406_00650)	-	144083..144547 (-)	465	WP_003089195.1	MarR family winged helix-turn-helix transcriptional regulator	-
FY406_RS00655 (FY406_00655)	-	144757..145806 (-)	1050	WP_223101714.1	serine hydrolase	-
FY406_RS00660 (FY406_00660)	sodA	146038..146643 (-)	606	WP_003089201.1	superoxide dismutase SodA	-
FY406_RS00665 (FY406_00665)	holA	146715..147752 (-)	1038	WP_003090709.1	DNA polymerase III subunit delta	-
FY406_RS00670 (FY406_00670)	-	148086..148697 (-)	612	WP_003089215.1	DUF805 domain-containing protein	-
FY406_RS00675 (FY406_00675)	comEC/celB	148946..151168 (-)	2223	WP_003089219.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FY406_RS00680 (FY406_00680)	-	151170..151832 (-)	663	WP_003089221.1	helix-hairpin-helix domain-containing protein	-
FY406_RS00685 (FY406_00685)	-	151999..152751 (-)	753	WP_003089224.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
FY406_RS00690 (FY406_00690)	-	153408..153688 (+)	281	Protein_134	HXXEE domain-containing protein	-
FY406_RS00695 (FY406_00695)	-	153735..154742 (+)	1008	WP_003089235.1	GIY-YIG nuclease family protein	-
FY406_RS00700 (FY406_00700)	-	155158..155355 (-)	198	WP_003089239.1	hypothetical protein	-
FY406_RS00705 (FY406_00705)	-	155500..155859 (-)	360	WP_003089240.1	hypothetical protein	-
FY406_RS00710 (FY406_00710)	-	155903..156151 (-)	249	WP_003089243.1	hypothetical protein	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 84640.36 Da
• Isoelectric Point: 10.2157

>NTDB_id=383544 FY406_RS00675 WP_003089219.1 148946..151168(-) (comEC/celB) [Streptococcus ratti strain ATCC 31377]
MLPLRPVYLAFLTILIYFLIYRFSFITVFLAFLSFIFLLAQYDQKTCLKTFVFLLLFGFYFYFSYQKIESDYQNVPKRAE
ELIIIPDTVSVNGDSLSFQGKSGHCIYQAFYTLKSQKEKHYFENLWKTSRIKVSANVTEADSQRNFGGFDYRSYLKTQKI
YRLASVKKIEKVVPEQDITFFERLHEWRRRALVSVNQKFPAPMRHYMTGLLFGYLDRSFDEMSDIYSSLGIIHLFALSGM
QVGFFIGNFRYLGLRLGLRREYMNWLQVPLSLVYAGLTGFSVSVVRSLLQKNLSNFGLTKMDNFAVTLFTMFFIMPHFLL
TAGGVLSFVYAFILGMADFQHLSQPKRWAAQILTLTLGVLPFLMWYFSSFQPLSVFLTAFFSFIFDGLILPVLTIVFFLS
PFILLTNLNLFFIILERFIVYINQIFSRPFVLGKPSLWVLILILLALALLYDYRKKRLLAAVLSVFLALLFLMTKNPPAN
EVTVVDIGQGDSIFLRDIKGQTILIDVGGRVPFSKSAEWQQRMSDANAEKTLIPYLKSRGVSKINQLVLTHTDTDHMGDM
EAVAKAFKIGQVLVSSGSLTNAGFAARLKKMQVKVSVLKAGDRLPIMGSQLQVLYPFKTGDGGNNDSVVLYGRLLNLSFL
FTGDLEKEGEDKLMAAYPKLKTDILKAGHHGSKGASSAEFLRQIRPQATLISAGKNNWYRHPHQETLKRLIKVRSQIYRT
DQQGALRFTGIKNWTLETVN

Nucleotide

• Length: 2223 bp

>NTDB_id=383544 FY406_RS00675 WP_003089219.1 148946..151168(-) (comEC/celB) [Streptococcus ratti strain ATCC 31377]
ATGCTGCCGTTAAGACCTGTTTATCTGGCCTTTTTAACGATTTTGATTTATTTTTTAATCTATCGCTTCTCCTTCATAAC
TGTGTTCTTGGCCTTTTTAAGCTTTATCTTTCTTCTTGCTCAGTATGATCAAAAAACCTGTCTAAAAACCTTCGTATTCC
TGCTGCTTTTTGGATTTTATTTTTATTTTTCTTATCAAAAGATAGAATCTGACTATCAAAATGTCCCTAAGCGAGCTGAG
GAGCTCATAATTATCCCGGATACTGTCAGTGTTAATGGTGACAGTCTTAGTTTTCAGGGCAAGTCAGGACATTGCATCTA
TCAAGCTTTTTACACATTAAAATCTCAAAAAGAGAAGCATTACTTTGAGAATCTTTGGAAAACGAGCCGTATAAAGGTAT
CTGCTAATGTGACTGAAGCAGACAGTCAACGGAATTTTGGCGGTTTTGATTATCGAAGCTATTTAAAAACACAAAAGATT
TACCGCCTAGCTAGTGTCAAGAAGATAGAAAAGGTAGTGCCTGAGCAAGACATAACTTTTTTTGAAAGACTGCATGAATG
GCGGCGTCGAGCCTTGGTTTCCGTCAATCAAAAGTTTCCAGCTCCTATGCGCCATTACATGACCGGCTTGCTTTTTGGCT
ATTTAGACAGGTCCTTTGATGAAATGAGTGATATTTATTCCAGCTTAGGCATCATTCATCTTTTTGCTCTCTCGGGTATG
CAGGTTGGCTTTTTTATAGGTAATTTTCGCTACTTGGGCTTGCGCTTAGGTCTAAGGAGAGAGTATATGAATTGGCTGCA
GGTGCCTTTATCCTTGGTTTATGCTGGTTTAACAGGCTTCTCAGTATCTGTTGTCCGAAGCCTGCTGCAGAAGAACCTGT
CTAATTTTGGTCTTACAAAGATGGATAATTTTGCAGTGACCCTCTTTACTATGTTTTTTATCATGCCGCATTTTCTCTTA
ACAGCAGGCGGAGTGCTCAGTTTTGTCTATGCGTTTATTTTAGGAATGGCTGATTTTCAGCACCTATCTCAGCCAAAGCG
ATGGGCTGCCCAGATACTGACATTGACTTTGGGTGTTCTACCTTTTCTAATGTGGTATTTTAGCAGTTTTCAGCCCTTAT
CTGTCTTTTTAACAGCGTTTTTTTCCTTTATTTTTGACGGTCTTATCCTGCCGGTTTTGACAATTGTTTTCTTCTTGTCG
CCTTTTATATTATTGACAAATCTTAACTTATTTTTTATCATTTTAGAGCGATTTATTGTTTATATTAACCAGATTTTCAG
CCGTCCTTTTGTTTTGGGTAAACCGTCTTTGTGGGTATTAATACTTATTTTGCTGGCTCTGGCCCTGCTCTACGATTATC
GGAAGAAAAGATTGCTGGCTGCTGTGCTTAGTGTTTTTCTTGCTCTCTTATTTTTGATGACAAAAAATCCCCCGGCCAAT
GAGGTTACCGTGGTTGATATTGGACAGGGGGACAGCATTTTTTTACGAGATATCAAAGGACAAACAATTCTCATTGATGT
GGGAGGACGGGTGCCTTTTTCTAAGTCAGCTGAGTGGCAGCAGCGCATGAGCGATGCCAATGCTGAGAAAACTCTGATTC
CTTATTTGAAAAGCCGCGGTGTCAGTAAAATTAATCAACTGGTTCTTACACACACGGATACTGACCATATGGGAGATATG
GAGGCAGTCGCAAAGGCTTTTAAAATTGGACAAGTCTTAGTCAGTTCCGGCAGTCTGACCAATGCAGGTTTTGCAGCCAG
ATTAAAAAAGATGCAGGTGAAAGTCAGTGTTCTTAAGGCTGGAGACAGACTGCCTATCATGGGCAGTCAGCTGCAGGTGC
TCTATCCTTTTAAAACCGGAGATGGAGGCAATAATGATTCTGTGGTTCTCTATGGCAGGCTTCTAAATTTGAGTTTTCTT
TTTACAGGTGACTTAGAAAAAGAGGGAGAGGATAAGTTAATGGCGGCCTACCCTAAACTAAAAACCGATATCTTAAAAGC
AGGACATCATGGATCTAAAGGTGCTTCTTCTGCTGAGTTTTTAAGGCAGATCCGACCTCAAGCAACCCTTATTTCTGCTG
GGAAAAATAACTGGTACAGGCATCCGCATCAAGAAACTTTGAAACGTTTAATTAAGGTTAGAAGCCAGATTTATCGGACG
GATCAGCAAGGTGCCCTTCGTTTCACAGGAATTAAAAATTGGACACTTGAAACAGTGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (488-694)

• Competence protein (Competence) (210-456)

• Domain of unknown function (DUF4131) (DUF4131) (21-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis NCTC 12261	51.21	100	0.515
comEC/celB	Streptococcus mitis SK321	50.539	100	0.507
comEC/celB	Streptococcus pneumoniae Rx1	49.529	100	0.497
comEC/celB	Streptococcus pneumoniae D39	49.529	100	0.497
comEC/celB	Streptococcus pneumoniae R6	49.529	100	0.497
comEC/celB	Streptococcus pneumoniae TIGR4	49.26	100	0.495
comEC	Lactococcus lactis subsp. cremoris KW2	45.405	100	0.454