Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FYN22_RS06910 | Genome accession | NZ_CP043307 |
| Coordinates | 1446855..1447217 (+) | Length | 120 a.a. |
| NCBI ID | WP_236769397.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain Acsw19 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1441855..1452217
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYN22_RS06880 (FYN22_06880) | kdsB | 1442619..1443380 (+) | 762 | WP_148825943.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FYN22_RS06885 (FYN22_06885) | - | 1443400..1444383 (+) | 984 | WP_148825944.1 | DNA polymerase III subunit delta' C-terminal domain-containing protein | - |
| FYN22_RS06890 (FYN22_06890) | - | 1444398..1444739 (+) | 342 | WP_058869739.1 | PilZ domain-containing protein | - |
| FYN22_RS06895 (FYN22_06895) | - | 1444766..1445539 (+) | 774 | WP_148825945.1 | TatD family hydrolase | - |
| FYN22_RS06900 (FYN22_06900) | - | 1445585..1446199 (+) | 615 | WP_004696845.1 | TetR/AcrR family transcriptional regulator | - |
| FYN22_RS06905 (FYN22_06905) | - | 1446212..1446781 (+) | 570 | WP_148825946.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| FYN22_RS06910 (FYN22_06910) | xcpV | 1446855..1447217 (+) | 363 | WP_236769397.1 | type II secretion system protein | Machinery gene |
| FYN22_RS06915 (FYN22_06915) | xcpW | 1447214..1447834 (+) | 621 | WP_148825948.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FYN22_RS06920 (FYN22_06920) | gspK | 1447913..1448863 (+) | 951 | WP_148825949.1 | type II secretion system minor pseudopilin GspK | - |
| FYN22_RS06925 (FYN22_06925) | - | 1448986..1449582 (+) | 597 | WP_004696854.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FYN22_RS06930 (FYN22_06930) | ung | 1449624..1450337 (+) | 714 | WP_148825950.1 | uracil-DNA glycosylase | - |
| FYN22_RS06935 (FYN22_06935) | - | 1450334..1451455 (+) | 1122 | WP_148825951.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FYN22_RS06940 (FYN22_06940) | tadA | 1451461..1451961 (+) | 501 | WP_148825952.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13127.98 Da Isoelectric Point: 7.2021
>NTDB_id=382764 FYN22_RS06910 WP_236769397.1 1446855..1447217(+) (xcpV) [Acinetobacter johnsonii strain Acsw19]
MLEVMVALAIFATAAVALTKVGMQYTQSTAHAILRTKAQFVALNEISMMEINRDWLQGTASKQITQQGETWQIDKSAQAT
ISTNVQRVNVQVSLVNTETGKVDSGVTSLIFFNHRDGSQP
MLEVMVALAIFATAAVALTKVGMQYTQSTAHAILRTKAQFVALNEISMMEINRDWLQGTASKQITQQGETWQIDKSAQAT
ISTNVQRVNVQVSLVNTETGKVDSGVTSLIFFNHRDGSQP
Nucleotide
Download Length: 363 bp
>NTDB_id=382764 FYN22_RS06910 WP_236769397.1 1446855..1447217(+) (xcpV) [Acinetobacter johnsonii strain Acsw19]
TTGCTGGAAGTAATGGTGGCATTGGCTATTTTTGCCACGGCAGCGGTCGCTTTAACCAAAGTGGGTATGCAATATACTCA
GTCTACAGCCCATGCCATCTTGCGTACCAAGGCACAATTTGTTGCCTTGAATGAAATTTCTATGATGGAAATCAATCGGG
ATTGGCTACAAGGCACGGCCTCTAAACAAATCACCCAACAAGGTGAAACTTGGCAAATTGATAAATCAGCGCAGGCAACG
ATTAGTACTAATGTGCAACGCGTCAATGTACAAGTGAGCTTGGTGAATACTGAAACTGGAAAAGTAGATTCGGGTGTTAC
GAGTTTAATTTTTTTTAACCATCGTGATGGAAGCCAACCATGA
TTGCTGGAAGTAATGGTGGCATTGGCTATTTTTGCCACGGCAGCGGTCGCTTTAACCAAAGTGGGTATGCAATATACTCA
GTCTACAGCCCATGCCATCTTGCGTACCAAGGCACAATTTGTTGCCTTGAATGAAATTTCTATGATGGAAATCAATCGGG
ATTGGCTACAAGGCACGGCCTCTAAACAAATCACCCAACAAGGTGAAACTTGGCAAATTGATAAATCAGCGCAGGCAACG
ATTAGTACTAATGTGCAACGCGTCAATGTACAAGTGAGCTTGGTGAATACTGAAACTGGAAAAGTAGATTCGGGTGTTAC
GAGTTTAATTTTTTTTAACCATCGTGATGGAAGCCAACCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
72.807 |
95 |
0.692 |