Detailed information NTG0382765

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FYN22_RS06915
• Genome accession: NZ_CP043307
• Coordinates: 1447214..1447834 (+)
• Length: 206 a.a.
• NCBI ID: WP_148825948.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain Acsw19
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1442214..1452834

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYN22_RS06880 (FYN22_06880)	kdsB	1442619..1443380 (+)	762	WP_148825943.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FYN22_RS06885 (FYN22_06885)	-	1443400..1444383 (+)	984	WP_148825944.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
FYN22_RS06890 (FYN22_06890)	-	1444398..1444739 (+)	342	WP_058869739.1	PilZ domain-containing protein	-
FYN22_RS06895 (FYN22_06895)	-	1444766..1445539 (+)	774	WP_148825945.1	TatD family hydrolase	-
FYN22_RS06900 (FYN22_06900)	-	1445585..1446199 (+)	615	WP_004696845.1	TetR/AcrR family transcriptional regulator	-
FYN22_RS06905 (FYN22_06905)	-	1446212..1446781 (+)	570	WP_148825946.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
FYN22_RS06910 (FYN22_06910)	xcpV	1446855..1447217 (+)	363	WP_236769397.1	type II secretion system protein	Machinery gene
FYN22_RS06915 (FYN22_06915)	xcpW	1447214..1447834 (+)	621	WP_148825948.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FYN22_RS06920 (FYN22_06920)	gspK	1447913..1448863 (+)	951	WP_148825949.1	type II secretion system minor pseudopilin GspK	-
FYN22_RS06925 (FYN22_06925)	-	1448986..1449582 (+)	597	WP_004696854.1	6-pyruvoyl trahydropterin synthase family protein	-
FYN22_RS06930 (FYN22_06930)	ung	1449624..1450337 (+)	714	WP_148825950.1	uracil-DNA glycosylase	-
FYN22_RS06935 (FYN22_06935)	-	1450334..1451455 (+)	1122	WP_148825951.1	enoyl-CoA hydratase/isomerase family protein	-
FYN22_RS06940 (FYN22_06940)	tadA	1451461..1451961 (+)	501	WP_148825952.1	tRNA adenosine(34) deaminase TadA	-
FYN22_RS06945 (FYN22_06945)	-	1452037..1452468 (+)	432	WP_004696860.1	SRPBCC family protein	-

Sequence

Protein

• Length: 206 a.a.
• Molecular weight: 23593.14 Da
• Isoelectric Point: 5.3491

>NTDB_id=382765 FYN22_RS06915 WP_148825948.1 1447214..1447834(+) (xcpW) [Acinetobacter johnsonii strain Acsw19]
MTKRSGFTLVELLVAIAIFAVLSALGWKVFDYLIKIKERNTQHEQRLGQLQEAYQQVLRDTVQIVPITANVAGQVQPAVM
LQNGQLTFSKTGVTDPLMQGIPPEERVEYIYKADEKKLYRYKYKNLNQTGNDQPETSVLLDSVDQFQIMLLNPNEMAQWP
EVALSENDVTQTKILPRGLKINLTVNEVSYEWVFSLLNTDFLKQKN

Nucleotide

• Length: 621 bp

>NTDB_id=382765 FYN22_RS06915 WP_148825948.1 1447214..1447834(+) (xcpW) [Acinetobacter johnsonii strain Acsw19]
ATGACAAAACGCTCAGGCTTTACTTTGGTTGAGTTATTGGTGGCAATCGCGATTTTTGCTGTGCTTTCAGCTTTGGGTTG
GAAGGTTTTTGATTATCTGATCAAGATTAAAGAGCGTAATACCCAGCATGAACAGCGCTTAGGTCAGCTACAAGAAGCAT
ATCAACAAGTGTTACGTGACACGGTGCAAATTGTTCCAATTACTGCCAATGTTGCAGGGCAGGTTCAACCCGCAGTCATG
TTGCAAAATGGTCAGTTAACCTTTAGTAAAACTGGCGTGACTGATCCTTTGATGCAAGGCATACCGCCTGAAGAGCGAGT
TGAATATATTTATAAAGCAGATGAAAAAAAACTGTACCGTTATAAATATAAAAATTTAAATCAAACCGGTAATGATCAAC
CTGAAACCAGTGTTTTACTTGATTCAGTTGATCAATTTCAAATTATGTTACTCAATCCCAATGAAATGGCACAATGGCCT
GAGGTGGCATTGAGTGAAAATGATGTAACTCAGACAAAAATACTACCGCGCGGTTTAAAAATAAACCTCACTGTTAATGA
AGTGAGTTATGAATGGGTGTTTAGTTTATTAAATACAGACTTTTTAAAACAAAAAAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	58.706	97.573	0.573