Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FYN22_RS01260 | Genome accession | NZ_CP043307 |
| Coordinates | 279520..280047 (+) | Length | 175 a.a. |
| NCBI ID | WP_094148569.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain Acsw19 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 274520..285047
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYN22_RS01245 (FYN22_01245) | pilM | 277087..278145 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| FYN22_RS01250 (FYN22_01250) | pilN | 278145..278801 (+) | 657 | WP_148825384.1 | PilN domain-containing protein | Machinery gene |
| FYN22_RS01255 (FYN22_01255) | pilO | 278798..279520 (+) | 723 | WP_148825385.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FYN22_RS01260 (FYN22_01260) | pilP | 279520..280047 (+) | 528 | WP_094148569.1 | pilus assembly protein PilP | Machinery gene |
| FYN22_RS01265 (FYN22_01265) | pilQ | 280067..282145 (+) | 2079 | WP_148825386.1 | type IV pilus secretin PilQ | Machinery gene |
| FYN22_RS01270 (FYN22_01270) | - | 282234..282716 (+) | 483 | WP_249303512.1 | shikimate kinase | - |
| FYN22_RS01275 (FYN22_01275) | aroB | 282747..283832 (+) | 1086 | WP_148825387.1 | 3-dehydroquinate synthase | - |
| FYN22_RS01280 (FYN22_01280) | - | 283840..284679 (+) | 840 | WP_148825388.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19371.56 Da Isoelectric Point: 7.1331
>NTDB_id=382751 FYN22_RS01260 WP_094148569.1 279520..280047(+) (pilP) [Acinetobacter johnsonii strain Acsw19]
MKYQNLMLSLCVGLFLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKYQNLMLSLCVGLFLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=382751 FYN22_RS01260 WP_094148569.1 279520..280047(+) (pilP) [Acinetobacter johnsonii strain Acsw19]
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTAGGACTATTCCTTGTCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAACCCCCATTGCCGATTGAACCTGCGCCAGATTTTCCACCTGTCCCGACTTTTA
ATTATGCTGCGCATCAATTAAAGAGCCCGTTTATGCCAAGCTCGTTAGCGGCTGAACTGAAGATTATGGCCGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAGCCTTTGGAAAGTTATGCGATTGAATCGCTTAACATGAAAGGCAGCATGCG
CGGGCAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGTGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTAGGACTATTCCTTGTCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAACCCCCATTGCCGATTGAACCTGCGCCAGATTTTCCACCTGTCCCGACTTTTA
ATTATGCTGCGCATCAATTAAAGAGCCCGTTTATGCCAAGCTCGTTAGCGGCTGAACTGAAGATTATGGCCGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAGCCTTTGGAAAGTTATGCGATTGAATCGCTTAACATGAAAGGCAGCATGCG
CGGGCAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGTGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
77.143 |
100 |
0.771 |
| comL | Acinetobacter baylyi ADP1 |
71.429 |
100 |
0.714 |