Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | FYN22_RS01250 | Genome accession | NZ_CP043307 |
| Coordinates | 278145..278801 (+) | Length | 218 a.a. |
| NCBI ID | WP_148825384.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain Acsw19 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 273145..283801
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYN22_RS01235 (FYN22_01235) | - | 273555..274361 (+) | 807 | WP_148825382.1 | putative RNA methyltransferase | - |
| FYN22_RS01240 (FYN22_01240) | ponA | 274393..276921 (-) | 2529 | WP_148825383.1 | penicillin-binding protein PBP1a | - |
| FYN22_RS01245 (FYN22_01245) | pilM | 277087..278145 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| FYN22_RS01250 (FYN22_01250) | pilN | 278145..278801 (+) | 657 | WP_148825384.1 | PilN domain-containing protein | Machinery gene |
| FYN22_RS01255 (FYN22_01255) | pilO | 278798..279520 (+) | 723 | WP_148825385.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FYN22_RS01260 (FYN22_01260) | pilP | 279520..280047 (+) | 528 | WP_094148569.1 | pilus assembly protein PilP | Machinery gene |
| FYN22_RS01265 (FYN22_01265) | pilQ | 280067..282145 (+) | 2079 | WP_148825386.1 | type IV pilus secretin PilQ | Machinery gene |
| FYN22_RS01270 (FYN22_01270) | - | 282234..282716 (+) | 483 | WP_249303512.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 24226.65 Da Isoelectric Point: 5.1439
>NTDB_id=382749 FYN22_RS01250 WP_148825384.1 278145..278801(+) (pilN) [Acinetobacter johnsonii strain Acsw19]
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQIKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEETYGTFVVTADLDEIAQPVAPDATTPEAASTVNNSTAGAAQ
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQIKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEETYGTFVVTADLDEIAQPVAPDATTPEAASTVNNSTAGAAQ
Nucleotide
Download Length: 657 bp
>NTDB_id=382749 FYN22_RS01250 WP_148825384.1 278145..278801(+) (pilN) [Acinetobacter johnsonii strain Acsw19]
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCTTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTGGAAGATCAAGAACAAGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTCCAAATAAAGTCGTTGGAAGGTCTGCAAGAACAGCGCAATGCA
ATTGTAGAGCGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGTCCTGTGGCTGTTCGTTTGGTCGATGAAATGGTACG
TGTCACTCCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAGTTCTTACGTAACCTCGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAACCTATGGCACCTTTGTGGTCACGGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTGATGCGACTACACCTGAAGCAGCAAGCACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCTTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTGGAAGATCAAGAACAAGCCA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTCCAAATAAAGTCGTTGGAAGGTCTGCAAGAACAGCGCAATGCA
ATTGTAGAGCGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGTCCTGTGGCTGTTCGTTTGGTCGATGAAATGGTACG
TGTCACTCCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACAGTTGCGGAGTTCTTACGTAACCTCGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAACCTATGGCACCTTTGTGGTCACGGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTGATGCGACTACACCTGAAGCAGCAAGCACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
69.378 |
95.872 |
0.665 |
| comN | Acinetobacter baylyi ADP1 |
73.096 |
90.367 |
0.661 |