Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FXN57_RS02825 | Genome accession | NZ_CP043005 |
| Coordinates | 533283..533768 (+) | Length | 161 a.a. |
| NCBI ID | WP_042889788.1 | Uniprot ID | - |
| Organism | Aggregatibacter actinomycetemcomitans strain PN_696 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 528283..538768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXN57_RS02805 (FXN57_02800) | secM | 528962..529279 (-) | 318 | WP_005561253.1 | secA translation cis-regulator SecM | - |
| FXN57_RS02810 (FXN57_02805) | - | 529371..529682 (+) | 312 | WP_005561250.1 | DciA family protein | - |
| FXN57_RS02815 (FXN57_02810) | - | 529803..530213 (+) | 411 | WP_148323766.1 | MerR family transcriptional regulator | - |
| FXN57_RS02820 (FXN57_02815) | uvrA | 530282..533113 (-) | 2832 | WP_148323768.1 | excinuclease ABC subunit UvrA | - |
| FXN57_RS02825 (FXN57_02820) | ssb | 533283..533768 (+) | 486 | WP_042889788.1 | single-stranded DNA-binding protein | Machinery gene |
| FXN57_RS02830 (FXN57_02825) | - | 534091..535023 (+) | 933 | WP_148323770.1 | nucleotidyltransferase | - |
| FXN57_RS12095 | - | 535025..535267 (+) | 243 | WP_257797621.1 | hypothetical protein | - |
| FXN57_RS02835 (FXN57_02830) | - | 535267..536646 (+) | 1380 | WP_262404674.1 | ThiF family adenylyltransferase | - |
| FXN57_RS02840 (FXN57_02835) | - | 536707..537474 (-) | 768 | WP_148363042.1 | IS5 family transposase | - |
| FXN57_RS02845 (FXN57_02840) | - | 537609..537995 (+) | 387 | WP_392388731.1 | Mov34/MPN/PAD-1 family protein | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 18048.92 Da Isoelectric Point: 5.3111
>NTDB_id=380162 FXN57_RS02825 WP_042889788.1 533283..533768(+) (ssb) [Aggregatibacter actinomycetemcomitans strain PN_696]
MAGVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVLQMLDSRADRQFGGNYTPAAVAQPSYPSQQQSAPRSAPASKPATEAPMDNFDDDIP
F
MAGVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVLQMLDSRADRQFGGNYTPAAVAQPSYPSQQQSAPRSAPASKPATEAPMDNFDDDIP
F
Nucleotide
Download Length: 486 bp
>NTDB_id=380162 FXN57_RS02825 WP_042889788.1 533283..533768(+) (ssb) [Aggregatibacter actinomycetemcomitans strain PN_696]
ATGGCTGGAGTAAATAAAGTGATTATTGTCGGTAATTTAGGTAACGATCCTGAAGTCCGCACCATGCCGAACGGCGAAGC
CGTCGCCAACATCACTGTTGCCACCAGTGAAAGCTGGAATGACAAAAACACCGGCGAACGCCGTGAAGTCACCGAATGGC
ACCGTATCGTATTTTATCGCCGCCAGGCAGAAGTGGCGGGGGAATACCTGCGTAAAGGGTCTAAAGTGTATGTTGAAGGA
CGCTTAAGAACCCGTAAATGGCAAGATCAAAACGGTCAGGATCGCTACACCACCGAAATCCAGGGCGACGTTTTACAAAT
GTTAGACAGCCGTGCCGATCGCCAATTCGGCGGAAACTACACACCGGCTGCAGTTGCCCAACCAAGTTATCCAAGCCAAC
AACAAAGCGCCCCACGCAGTGCGCCGGCAAGTAAACCTGCCACTGAAGCGCCGATGGATAATTTTGATGATGATATTCCG
TTCTGA
ATGGCTGGAGTAAATAAAGTGATTATTGTCGGTAATTTAGGTAACGATCCTGAAGTCCGCACCATGCCGAACGGCGAAGC
CGTCGCCAACATCACTGTTGCCACCAGTGAAAGCTGGAATGACAAAAACACCGGCGAACGCCGTGAAGTCACCGAATGGC
ACCGTATCGTATTTTATCGCCGCCAGGCAGAAGTGGCGGGGGAATACCTGCGTAAAGGGTCTAAAGTGTATGTTGAAGGA
CGCTTAAGAACCCGTAAATGGCAAGATCAAAACGGTCAGGATCGCTACACCACCGAAATCCAGGGCGACGTTTTACAAAT
GTTAGACAGCCGTGCCGATCGCCAATTCGGCGGAAACTACACACCGGCTGCAGTTGCCCAACCAAGTTATCCAAGCCAAC
AACAAAGCGCCCCACGCAGTGCGCCGGCAAGTAAACCTGCCACTGAAGCGCCGATGGATAATTTTGATGATGATATTCCG
TTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
71.111 |
100 |
0.795 |
| ssb | Vibrio cholerae strain A1552 |
58.382 |
100 |
0.627 |
| ssb | Neisseria meningitidis MC58 |
46.893 |
100 |
0.516 |
| ssb | Neisseria gonorrhoeae MS11 |
47.159 |
100 |
0.516 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
32.24 |
100 |
0.366 |