Detailed information NTG0377891

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: HB751_RS07660
• Genome accession: NZ_CP050272
• Coordinates: 1574659..1575654 (-)
• Length: 331 a.a.
• NCBI ID: WP_002284808.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain P6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1569659..1580654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB751_RS07640 (HB751_07640)	thrC	1569795..1571279 (-)	1485	WP_002285735.1	threonine synthase	-
HB751_RS07645 (HB751_07645)	-	1571961..1573751 (-)	1791	WP_019804619.1	acyltransferase family protein	-
HB751_RS07650 (HB751_07650)	-	1573748..1574131 (-)	384	WP_011074470.1	membrane protein	-
HB751_RS07655 (HB751_07655)	-	1574196..1574621 (-)	426	WP_002278431.1	low molecular weight protein-tyrosine-phosphatase	-
HB751_RS07660 (HB751_07660)	ruvB	1574659..1575654 (-)	996	WP_002284808.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
HB751_RS07665 (HB751_07665)	-	1575989..1577830 (+)	1842	WP_002283787.1	carbohydrate-binding domain-containing protein	-
HB751_RS07670 (HB751_07670)	comR	1578365..1579279 (-)	915	WP_019804618.1	helix-turn-helix domain-containing protein	Regulator
HB751_RS07675 (HB751_07675)	-	1579664..1580350 (-)	687	WP_019804617.1	DNA alkylation repair protein	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 37241.68 Da
• Isoelectric Point: 4.7070

>NTDB_id=377891 HB751_RS07660 WP_002284808.1 1574659..1575654(-) (ruvB) [Streptococcus mutans strain P6]
MTRILDNEPMGDEEFAERTLRPQYLQEYIGQDKVKDQLKIFIKAAKQRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAVLNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYADIDLTEIVERTADIFEMTITHQAALELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DKITDKALTMLDVDHEGLDYVDQKILKTMIEMYHGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIIRTRSGRVATAK
AYEHLGYRYTE

Nucleotide

• Length: 996 bp

>NTDB_id=377891 HB751_RS07660 WP_002284808.1 1574659..1575654(-) (ruvB) [Streptococcus mutans strain P6]
ATGACTAGAATTTTAGATAACGAACCTATGGGTGATGAGGAATTTGCAGAACGCACACTTCGTCCGCAGTATTTACAGGA
ATATATTGGTCAGGATAAGGTTAAAGACCAGCTGAAGATCTTCATCAAAGCAGCTAAACAACGTGATGAGGCTTTGGATC
ATGTCCTTTTATTTGGTCCTCCCGGCCTTGGTAAGACCACCATGGCTTTTGTTATTGCCAATGAATTGGGGGTTAATCTT
AAGCAAACCAGCGGTCCAGCTATTGAAAAAGCTGGTGATTTGGTTGCTGTTTTAAATGACTTAGAGCCTGGGGATGTTCT
TTTTATTGATGAAATTCATCGGCTGCCTATGGCTGTTGAGGAAGTTCTTTATAGTGCCATGGAAGATTTTTATATTGACA
TTATGATTGGTGCGGGAGAAACTTCTCGCAGCGTGCATTTGGATTTGCCGCCTTTTACTTTAATTGGGGCGACAACACGG
GCAGGTATGTTGTCAAATCCTTTGCGGGCGCGTTTTGGGATTACAGGTCATATGGAATATTATGCAGATATCGATTTAAC
TGAAATTGTTGAGCGAACAGCGGATATTTTTGAGATGACCATTACCCATCAAGCTGCGTTAGAATTAGCACGGCGTTCCC
GTGGGACTCCGCGTATTGCTAACCGACTCTTAAAACGTGTCCGAGATTATGCCCAAATTATGGGAGATGGTCTTATTGAT
GATAAAATAACAGATAAGGCTTTGACCATGCTTGATGTTGATCATGAAGGCCTTGATTATGTTGATCAGAAGATCCTTAA
GACGATGATTGAGATGTACCATGGCGGGCCTGTTGGTCTGGGGACTCTGTCAGTTAATATTGCCGAGGAACGTGAGACCG
TTGAAGACATGTATGAGCCCTATCTTATTCAAAAGGGATTTATCATACGGACTCGCAGTGGACGTGTAGCCACTGCCAAA
GCTTATGAACATTTGGGTTATCGTTACACAGAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	91.541	100	0.915
ruvB	Streptococcus pneumoniae R6	91.239	100	0.912
ruvB	Streptococcus pneumoniae D39	91.239	100	0.912
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.681	97.583	0.592
ruvB	Helicobacter pylori 26695	50.464	97.583	0.492
ruvB	Synechocystis sp. PCC 6803	50.479	94.562	0.477