Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NWAT_RS00565 Genome accession   NC_014315
Coordinates   126812..127168 (-) Length   118 a.a.
NCBI ID   WP_049773035.1    Uniprot ID   -
Organism   Nitrosococcus watsonii C-113     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 121812..132168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWAT_RS00545 (Nwat_0115) - 123249..124097 (-) 849 WP_013219206.1 protein-glutamate O-methyltransferase CheR -
  NWAT_RS00550 (Nwat_0116) - 124111..125784 (-) 1674 WP_013219207.1 methyl-accepting chemotaxis protein -
  NWAT_RS00555 (Nwat_0117) - 125816..126352 (-) 537 WP_013219208.1 chemotaxis protein CheW -
  NWAT_RS00560 (Nwat_0118) - 126364..126729 (-) 366 WP_013219209.1 PleD family two-component system response regulator -
  NWAT_RS00565 (Nwat_0119) pilG 126812..127168 (-) 357 WP_049773035.1 PleD family two-component system response regulator Regulator
  NWAT_RS00570 (Nwat_0121) - 128123..129310 (+) 1188 WP_013219212.1 hypothetical protein -
  NWAT_RS00575 (Nwat_0122) - 129363..129908 (+) 546 WP_013219213.1 ATP/GTP-binding protein -
  NWAT_RS00580 (Nwat_0123) - 130016..130435 (+) 420 WP_232420168.1 hypothetical protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 13168.27 Da        Isoelectric Point: 8.1468

>NTDB_id=37759 NWAT_RS00565 WP_049773035.1 126812..127168(-) (pilG) [Nitrosococcus watsonii C-113]
MVVDDSKTIRKTAETLLKKFGCKVVTAEDGFEALPKINQHHPDIIFIDIMMPRLDGYQTCTLIKNNSALKNTPVIMLSSK
DGLFDRARGRIAGCDQYLTKPFTREELLGAISSHCSHS

Nucleotide


Download         Length: 357 bp        

>NTDB_id=37759 NWAT_RS00565 WP_049773035.1 126812..127168(-) (pilG) [Nitrosococcus watsonii C-113]
ATGGTCGTTGACGATAGTAAAACTATTCGTAAAACAGCAGAAACTTTACTTAAAAAATTTGGTTGCAAAGTAGTAACAGC
AGAAGATGGATTCGAGGCTCTTCCCAAAATAAACCAACACCACCCAGACATCATATTTATAGATATTATGATGCCAAGGC
TAGATGGTTATCAAACCTGCACCTTGATAAAAAACAACTCTGCATTGAAAAATACTCCAGTTATTATGCTCTCTAGCAAA
GATGGTTTATTTGACCGAGCACGTGGCCGTATCGCGGGTTGTGACCAATATCTAACAAAACCTTTTACTCGTGAAGAACT
CTTAGGTGCTATTTCAAGCCACTGCAGTCACTCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.828

98.305

0.686
  pilH Synechocystis sp. PCC 6803

45.045

94.068

0.424
  vicR Streptococcus mutans UA159

40.678

100

0.407
  chpA Acinetobacter baumannii strain A118

40.708

95.763

0.39
  micA Streptococcus pneumoniae Cp1015

38.136

100

0.381

Multiple sequence alignment