Detailed information NTG0037704

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HPSA_RS00765
• Genome accession: NC_017361
• Coordinates: 156792..157835 (+)
• Length: 347 a.a.
• NCBI ID: WP_000963132.1
• Uniprot ID: -
• Organism: Helicobacter pylori SouthAfrica7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 151792..162835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSA_RS00730 (HPSA_00735)	-	152102..152320 (+)	219	WP_014534716.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
HPSA_RS00735 (HPSA_00740)	ccoP	152322..153200 (+)	879	WP_000346808.1	cytochrome-c oxidase, cbb3-type subunit III	-
HPSA_RS00740 (HPSA_00745)	-	153211..153417 (+)	207	WP_000670523.1	DUF4006 family protein	-
HPSA_RS00745 (HPSA_00755)	-	153518..154105 (+)	588	WP_000839422.1	hypothetical protein	-
HPSA_RS00750 (HPSA_00760)	-	154117..154698 (+)	582	WP_000660391.1	hypothetical protein	-
HPSA_RS00755 (HPSA_00765)	-	155065..155832 (+)	768	WP_000506306.1	hypothetical protein	-
HPSA_RS00760 (HPSA_00770)	-	155829..156692 (-)	864	WP_000626206.1	menaquinone biosynthesis family protein	-
HPSA_RS00765 (HPSA_00775)	recA	156792..157835 (+)	1044	WP_000963132.1	recombinase RecA	Machinery gene
HPSA_RS00770 (HPSA_00780)	eno	157846..159126 (+)	1281	WP_000955680.1	phosphopyruvate hydratase	-
HPSA_RS00775 (HPSA_00785)	-	159119..159394 (+)	276	WP_000841064.1	hypothetical protein	-
HPSA_RS00780 (HPSA_00790)	-	159411..160007 (+)	597	WP_014534717.1	AMIN domain-containing protein	-
HPSA_RS00785 (HPSA_00795)	-	160012..160500 (+)	489	WP_001164319.1	shikimate kinase	-
HPSA_RS00790 (HPSA_00800)	-	160522..161478 (+)	957	WP_000952260.1	PDC sensor domain-containing protein	-
HPSA_RS00795 (HPSA_00805)	-	161475..162581 (-)	1107	WP_000028842.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37638.33 Da
• Isoelectric Point: 5.5216

>NTDB_id=37704 HPSA_RS00765 WP_000963132.1 156792..157835(+) (recA) [Helicobacter pylori SouthAfrica7]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVYYAKRLGVDTENLLVSQPSTGEEALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMTGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=37704 HPSA_RS00765 WP_000963132.1 156792..157835(+) (recA) [Helicobacter pylori SouthAfrica7]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGATTCTATTTCTACGGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCTAAAGGCAGAATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTTTAAGCTTGCACATT
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGCGCGTTCATTGACGCTGAGCATGCCTTAGATGTGTATTATGCCAAGAG
ATTAGGCGTGGATACGGAAAATTTACTCGTTTCTCAACCAAGCACGGGCGAAGAAGCTTTAGAGATTTTAGAAACAATCA
CTAGAAGTGGGGGGATTGATTTAGTGGTGGTGGATTCGGTGGCGGCTCTCACGCCTAAAGCTGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAGATCACCGGTGTTTTGCACAAGATGAA
CACTACTCTCATTTTTATCAACCAAATAAGAATGAAAATCGGCATGACAGGTTATGGGAGTCCTGAGACCACAACTGGGG
GTAATGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCCGCTTTAAAACAAAACGAACAGCATATC
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAACAAAGTCGCTCCGCCTTTTAGGGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAGATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGCGGTGCATGGCTTA
GCTATCAGGATAAAAAGCTAGGGCAAGGCAGAGAAAACGCTAAAGCTTTATTGAAAGAAGATAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCTTTACCCGATGAGCCTTTAGAAGAAATGGA
ATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori 26695	98.271	100	0.983
recA	Helicobacter pylori strain NCTC11637	98.271	100	0.983
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.049	94.524	0.738
recA	Staphylococcus aureus strain ATCC 12600	62.757	98.271	0.617
recA	Neisseria gonorrhoeae MS11	65.538	93.66	0.614
recA	Neisseria gonorrhoeae strain FA1090	65.538	93.66	0.614
recA	Acinetobacter nosocomialis M2	61.988	98.559	0.611
recA	Bacillus subtilis subsp. subtilis str. 168	64.308	93.66	0.602
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.952	95.677	0.602
recA	Acinetobacter baumannii D1279779	62.997	94.236	0.594
recA	Ralstonia pseudosolanacearum GMI1000	61.012	96.83	0.591
recA	Acinetobacter baylyi ADP1	62.691	94.236	0.591
recA	Pseudomonas stutzeri DSM 10701	59.649	98.559	0.588
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.417	96.83	0.585
recA	Vibrio cholerae strain A1552	60.417	96.83	0.585
recA	Glaesserella parasuis strain SC1401	59.756	94.524	0.565
recA	Streptococcus pneumoniae R6	54.986	100	0.556
recA	Streptococcus pneumoniae R36A	54.986	100	0.556
recA	Streptococcus pneumoniae Rx1	54.986	100	0.556
recA	Streptococcus pneumoniae D39	54.986	100	0.556
recA	Streptococcus pneumoniae TIGR4	54.986	100	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	53.782	100	0.553
recA	Streptococcus pyogenes NZ131	56.667	95.101	0.539
recA	Lactococcus lactis subsp. cremoris KW2	56.839	94.813	0.539
recA	Streptococcus mitis NCTC 12261	56.535	94.813	0.536
recA	Streptococcus mitis SK321	56.535	94.813	0.536
recA	Streptococcus thermophilus LMG 18311	55.758	95.101	0.53
recA	Streptococcus thermophilus LMD-9	55.758	95.101	0.53
recA	Streptococcus mutans UA159	55.09	96.254	0.53
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.521	93.948	0.522