Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | HBA50_RS00845 | Genome accession | NZ_CP050133 |
| Coordinates | 164801..165028 (+) | Length | 75 a.a. |
| NCBI ID | WP_045500276.1 | Uniprot ID | - |
| Organism | Streptococcus cristatus ATCC 51100 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 159801..170028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA50_RS00825 (HBA50_00825) | - | 159819..161258 (+) | 1440 | WP_045500264.1 | O-antigen polymerase | - |
| HBA50_RS00830 (HBA50_00830) | - | 161265..162338 (+) | 1074 | WP_045500267.1 | polysaccharide pyruvyl transferase family protein | - |
| HBA50_RS00835 (HBA50_00835) | - | 162328..163563 (+) | 1236 | WP_045500270.1 | oligosaccharide flippase family protein | - |
| HBA50_RS00840 (HBA50_00840) | wecB | 163560..164648 (+) | 1089 | WP_045500273.1 | non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase | - |
| HBA50_RS00845 (HBA50_00845) | comW | 164801..165028 (+) | 228 | WP_045500276.1 | sigma(X)-activator ComW | Regulator |
| HBA50_RS00855 (HBA50_00855) | - | 165271..166539 (+) | 1269 | WP_045500279.1 | CapA family protein | - |
| HBA50_RS00860 (HBA50_00860) | - | 166674..167045 (+) | 372 | WP_045500282.1 | DUF1033 family protein | - |
| HBA50_RS00865 (HBA50_00865) | comGA | 167131..168072 (+) | 942 | WP_045500284.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HBA50_RS00870 (HBA50_00870) | comGB | 168020..169036 (+) | 1017 | WP_045500287.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HBA50_RS00875 (HBA50_00875) | comGC | 169033..169350 (+) | 318 | WP_045500288.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HBA50_RS00880 (HBA50_00880) | comGD | 169310..169744 (+) | 435 | WP_045500291.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HBA50_RS00885 (HBA50_00885) | comGE/cglE | 169710..170003 (+) | 294 | WP_200893262.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
Sequence
Protein
Download Length: 75 a.a. Molecular weight: 9402.64 Da Isoelectric Point: 5.5599
>NTDB_id=376859 HBA50_RS00845 WP_045500276.1 164801..165028(+) (comW) [Streptococcus cristatus ATCC 51100]
MEIQEIYNQFRDYYGELEDEYAHCQRTSLEWESLHLRYLIYYLMRYGIGEMKFFNAYHYRAAYRWYLQSLMLGSA
MEIQEIYNQFRDYYGELEDEYAHCQRTSLEWESLHLRYLIYYLMRYGIGEMKFFNAYHYRAAYRWYLQSLMLGSA
Nucleotide
Download Length: 228 bp
>NTDB_id=376859 HBA50_RS00845 WP_045500276.1 164801..165028(+) (comW) [Streptococcus cristatus ATCC 51100]
ATGGAAATTCAAGAAATTTATAATCAATTCAGAGATTACTATGGGGAGCTTGAGGATGAGTATGCTCATTGTCAAAGGAC
GAGTCTGGAGTGGGAAAGCCTGCATTTGCGCTATCTGATTTACTATTTGATGCGCTATGGTATTGGGGAGATGAAGTTTT
TTAATGCCTATCATTATCGGGCAGCTTATCGCTGGTATTTGCAGTCCTTGATGCTGGGCTCTGCCTGA
ATGGAAATTCAAGAAATTTATAATCAATTCAGAGATTACTATGGGGAGCTTGAGGATGAGTATGCTCATTGTCAAAGGAC
GAGTCTGGAGTGGGAAAGCCTGCATTTGCGCTATCTGATTTACTATTTGATGCGCTATGGTATTGGGGAGATGAAGTTTT
TTAATGCCTATCATTATCGGGCAGCTTATCGCTGGTATTTGCAGTCCTTGATGCTGGGCTCTGCCTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
45.205 |
97.333 |
0.44 |
| comW | Streptococcus pneumoniae D39 |
45.205 |
97.333 |
0.44 |
| comW | Streptococcus pneumoniae R6 |
45.205 |
97.333 |
0.44 |
| comW | Streptococcus pneumoniae TIGR4 |
45.205 |
97.333 |
0.44 |
| comW | Streptococcus mitis NCTC 12261 |
42.466 |
97.333 |
0.413 |
| comW | Streptococcus mitis SK321 |
42.466 |
97.333 |
0.413 |