Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   FPS98_RS03200 Genome accession   NZ_CP042161
Coordinates   690287..690565 (-) Length   92 a.a.
NCBI ID   WP_007721243.1    Uniprot ID   J2GYM8
Organism   Brevibacillus brevis strain HK544     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 685287..695565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPS98_RS03175 (FPS98_03175) - 685725..686933 (+) 1209 WP_144613516.1 PLP-dependent aminotransferase family protein -
  FPS98_RS03180 (FPS98_03180) - 686990..687808 (-) 819 WP_144613517.1 alpha/beta fold hydrolase -
  FPS98_RS03185 (FPS98_03185) - 687951..688799 (-) 849 WP_007721249.1 family 1 encapsulin nanocompartment shell protein -
  FPS98_RS03190 (FPS98_03190) - 688837..689436 (-) 600 WP_144613519.1 IMEF encapsulin system ferritin-like cargo protein -
  FPS98_RS03195 (FPS98_03195) - 689765..690046 (+) 282 WP_016742090.1 DUF2325 domain-containing protein -
  FPS98_RS30710 - 690110..690256 (+) 147 WP_186380543.1 hypothetical protein -
  FPS98_RS03200 (FPS98_03200) htrA 690287..690565 (-) 279 WP_007721243.1 S1C family serine protease Regulator
  FPS98_RS03205 (FPS98_03205) - 690588..692039 (-) 1452 WP_144613521.1 recombinase family protein -
  FPS98_RS03210 (FPS98_03210) - 692152..692472 (-) 321 WP_144613523.1 winged helix-turn-helix transcriptional regulator -
  FPS98_RS03215 (FPS98_03215) - 692672..693745 (+) 1074 WP_144613525.1 YheC/YheD family protein -
  FPS98_RS31260 - 693828..694034 (-) 207 Protein_641 trypsin-like peptidase domain-containing protein -
  FPS98_RS03225 (FPS98_03225) - 694484..695017 (+) 534 WP_144613527.1 PadR family transcriptional regulator -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 9771.26 Da        Isoelectric Point: 6.1950

>NTDB_id=375803 FPS98_RS03200 WP_007721243.1 690287..690565(-) (htrA) [Brevibacillus brevis strain HK544]
MATGGSPLGLENSVTAGIISAKNRRLQVAKRMYEEIFQTDAAINPGNSGGPLINLNGEVVGLNAFIIQSSQCLGFAIGID
ALKMQLEQYVFK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=375803 FPS98_RS03200 WP_007721243.1 690287..690565(-) (htrA) [Brevibacillus brevis strain HK544]
ATGGCGACAGGTGGTTCCCCACTTGGTTTGGAAAATTCTGTGACAGCGGGAATCATCAGTGCCAAAAACCGCCGCTTACA
GGTTGCGAAGCGAATGTACGAAGAAATTTTTCAGACGGATGCTGCCATTAACCCAGGAAATAGCGGAGGTCCACTCATTA
ATTTGAATGGGGAAGTCGTTGGTCTCAATGCATTCATCATTCAATCCAGCCAATGCTTGGGCTTCGCCATCGGAATTGAC
GCCCTCAAAATGCAACTGGAGCAATACGTATTCAAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J2GYM8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

46.939

100

0.5

  htrA Streptococcus pneumoniae Rx1

45.918

100

0.489

  htrA Streptococcus pneumoniae D39

45.918

100

0.489

  htrA Streptococcus pneumoniae R6

45.918

100

0.489

  htrA Streptococcus pneumoniae TIGR4

45.918

100

0.489

  htrA Streptococcus mutans UA159

47.727

95.652

0.457

  htrA Streptococcus gordonii str. Challis substr. CH1

41.237

100

0.435


Multiple sequence alignment