Detailed information NTG0375219

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: FPT06_RS04430
• Genome accession: NZ_CP041994
• Coordinates: 903412..903846 (-)
• Length: 144 a.a.
• NCBI ID: WP_009909097.1
• Uniprot ID: -
• Organism: Streptococcus suis strain INT-01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 898412..908846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPT06_RS04400 (FPT06_04400)	-	898599..899855 (-)	1257	WP_013730079.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
FPT06_RS04405 (FPT06_04405)	-	899866..900462 (-)	597	WP_009909104.1	folate family ECF transporter S component	-
FPT06_RS04415 (FPT06_04415)	-	900777..901964 (-)	1188	WP_013730078.1	acetate kinase	-
FPT06_RS04420 (FPT06_04420)	comYH	902014..902967 (-)	954	WP_013730077.1	class I SAM-dependent methyltransferase	Machinery gene
FPT06_RS04425 (FPT06_04425)	comGG	903024..903434 (-)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
FPT06_RS04430 (FPT06_04430)	comGF/cglF	903412..903846 (-)	435	WP_009909097.1	competence type IV pilus minor pilin ComGF	Machinery gene
FPT06_RS04435 (FPT06_04435)	comYE	903833..904126 (-)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
FPT06_RS04440 (FPT06_04440)	comGD	904098..904505 (-)	408	WP_009909093.1	competence type IV pilus minor pilin ComGD	-
FPT06_RS04445 (FPT06_04445)	comYC	904486..904767 (-)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
FPT06_RS04450 (FPT06_04450)	comYB	904769..905806 (-)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
FPT06_RS04455 (FPT06_04455)	comYA	905718..906668 (-)	951	WP_013730075.1	competence type IV pilus ATPase ComGA	Machinery gene
FPT06_RS04460 (FPT06_04460)	-	906754..907704 (+)	951	WP_002936565.1	S66 peptidase family protein	-
FPT06_RS04465 (FPT06_04465)	-	907739..908104 (-)	366	WP_002936568.1	DUF1033 family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16449.77 Da
• Isoelectric Point: 5.9234

>NTDB_id=375219 FPT06_RS04430 WP_009909097.1 903412..903846(-) (comGF/cglF) [Streptococcus suis strain INT-01]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=375219 FPT06_RS04430 WP_009909097.1 903412..903846(-) (comGF/cglF) [Streptococcus suis strain INT-01]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458