Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   FPL13_RS09080 Genome accession   NZ_CP041968
Coordinates   1835793..1836983 (-) Length   396 a.a.
NCBI ID   WP_049512719.1    Uniprot ID   A0A7L8W7E4
Organism   Streptococcus sp. KS 6     
Function   repress competence development (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1791697..1871002 1835793..1836983 within 0


Gene organization within MGE regions


Location: 1791697..1871002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL13_RS08810 (FPL13_08935) - 1792437..1792679 (-) 243 WP_049514295.1 hypothetical protein -
  FPL13_RS08815 (FPL13_08940) - 1793279..1795213 (+) 1935 WP_049514291.1 GBS Bsp-like repeat-containing protein -
  FPL13_RS08820 (FPL13_08945) purH 1795272..1796819 (-) 1548 WP_049514289.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  FPL13_RS08825 (FPL13_08950) - 1796827..1796991 (-) 165 WP_049514287.1 hypothetical protein -
  FPL13_RS08830 (FPL13_08955) purN 1797046..1797597 (-) 552 WP_049514285.1 phosphoribosylglycinamide formyltransferase -
  FPL13_RS08835 (FPL13_08960) purM 1797597..1798616 (-) 1020 WP_049514284.1 phosphoribosylformylglycinamidine cyclo-ligase -
  FPL13_RS08840 (FPL13_08965) purF 1798852..1800315 (-) 1464 WP_049514282.1 amidophosphoribosyltransferase -
  FPL13_RS08845 (FPL13_08970) - 1800406..1804131 (-) 3726 WP_049514281.1 phosphoribosylformylglycinamidine synthase -
  FPL13_RS08850 (FPL13_08975) purC 1804178..1804885 (-) 708 WP_003032064.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  FPL13_RS08855 (FPL13_08980) - 1805045..1805290 (-) 246 WP_049514280.1 acyl carrier protein -
  FPL13_RS08860 (FPL13_08985) plsX 1805287..1806285 (-) 999 WP_049514278.1 phosphate acyltransferase PlsX -
  FPL13_RS08865 (FPL13_08990) recO 1806282..1807054 (-) 773 Protein_1745 DNA repair protein RecO -
  FPL13_RS08870 (FPL13_08995) - 1807032..1808219 (-) 1188 WP_049514274.1 pyridoxal phosphate-dependent aminotransferase -
  FPL13_RS08875 (FPL13_09000) - 1808374..1809342 (-) 969 WP_049514273.1 ribose-phosphate diphosphokinase -
  FPL13_RS08880 (FPL13_09005) pcsB 1809475..1810698 (-) 1224 WP_049514271.1 peptidoglycan hydrolase PcsB -
  FPL13_RS08885 (FPL13_09010) mreD 1810808..1811308 (-) 501 WP_049514270.1 rod shape-determining protein MreD -
  FPL13_RS08890 (FPL13_09015) mreC 1811310..1812116 (-) 807 WP_049514268.1 rod shape-determining protein MreC -
  FPL13_RS09005 (FPL13_09130) comR/comR2 1819385..1819858 (-) 474 WP_192208621.1 sigma-70 family RNA polymerase sigma factor Regulator
  FPL13_RS09010 (FPL13_09135) ftsH 1820061..1822031 (-) 1971 WP_049512744.1 ATP-dependent zinc metalloprotease FtsH -
  FPL13_RS09015 (FPL13_09140) hpt 1822052..1822594 (-) 543 WP_049512741.1 hypoxanthine phosphoribosyltransferase -
  FPL13_RS09020 (FPL13_09145) tilS 1822600..1823877 (-) 1278 Protein_1754 tRNA lysidine(34) synthetase TilS -
  FPL13_RS09025 (FPL13_09150) - 1823874..1825154 (-) 1281 WP_049512737.1 serine hydrolase -
  FPL13_RS09875 (FPL13_09155) - 1825147..1825275 (-) 129 WP_152907026.1 SP_0009 family protein -
  FPL13_RS09030 (FPL13_09160) - 1825278..1825646 (-) 369 WP_003026832.1 septum formation initiator family protein -
  FPL13_RS09035 (FPL13_09165) - 1825639..1825905 (-) 267 WP_049512735.1 RNA-binding S4 domain-containing protein -
  FPL13_RS09040 (FPL13_09170) mfd 1825985..1829491 (-) 3507 WP_152907025.1 transcription-repair coupling factor -
  FPL13_RS09045 (FPL13_09175) pth 1829484..1830053 (-) 570 WP_003032454.1 aminoacyl-tRNA hydrolase -
  FPL13_RS09050 (FPL13_09180) ychF 1830126..1831241 (-) 1116 WP_049512731.1 redox-regulated ATPase YchF -
  FPL13_RS09055 (FPL13_09185) - 1831387..1831887 (+) 501 WP_049512729.1 YehR family protein -
  FPL13_RS09060 (FPL13_09190) - 1831919..1832107 (-) 189 WP_192208622.1 DUF951 domain-containing protein -
  FPL13_RS09065 (FPL13_09195) dnaN 1832107..1833243 (-) 1137 WP_049512726.1 DNA polymerase III subunit beta -
  FPL13_RS09070 (FPL13_09200) dnaA 1833400..1834644 (-) 1245 WP_412556309.1 chromosomal replication initiator protein DnaA -
  FPL13_RS09075 (FPL13_09205) spo0J 1834971..1835738 (-) 768 WP_049512721.1 ParB/RepB/Spo0J family partition protein Regulator
  FPL13_RS09080 (FPL13_09210) htrA 1835793..1836983 (-) 1191 WP_049512719.1 S1C family serine protease Regulator
  FPL13_RS09085 (FPL13_09215) rlmH 1837176..1837655 (+) 480 WP_049512717.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FPL13_RS09095 (FPL13_09225) - 1837936..1838082 (+) 147 WP_003029519.1 bacteriocin -
  FPL13_RS09100 (FPL13_09230) comD/comD2 1838103..1839425 (+) 1323 WP_405187536.1 sensor histidine kinase Regulator
  FPL13_RS09105 (FPL13_09235) comE 1839425..1840173 (+) 749 Protein_1771 competence system response regulator transcription factor ComE -
  FPL13_RS09110 (FPL13_09240) - 1840280..1841225 (+) 946 Protein_1772 IS30 family transposase -
  FPL13_RS09125 (FPL13_09255) - 1841622..1844196 (-) 2575 Protein_1773 YfhO family protein -
  FPL13_RS09130 (FPL13_09260) - 1844263..1845885 (-) 1623 WP_049514030.1 ATP-binding cassette domain-containing protein -
  FPL13_RS09135 (FPL13_09265) - 1846041..1846580 (+) 540 WP_049514031.1 NAD(P)H-dependent oxidoreductase -
  FPL13_RS09140 (FPL13_09270) - 1846602..1847291 (+) 690 WP_049514032.1 triose-phosphate isomerase -
  FPL13_RS09145 (FPL13_09275) galE 1847311..1848306 (+) 996 WP_065428428.1 UDP-glucose 4-epimerase GalE -
  FPL13_RS09150 (FPL13_09280) trpS 1848388..1849413 (+) 1026 WP_049514033.1 tryptophan--tRNA ligase -
  FPL13_RS09155 (FPL13_09285) guaB 1849545..1851026 (+) 1482 WP_049514035.1 IMP dehydrogenase -
  FPL13_RS09160 (FPL13_09290) recF 1851115..1852212 (-) 1098 WP_049514036.1 DNA replication/repair protein RecF -
  FPL13_RS09165 (FPL13_09295) yaaA 1852214..1852594 (-) 381 WP_003038263.1 S4 domain-containing protein YaaA -
  FPL13_RS09170 (FPL13_09300) yfmF 1852770..1854017 (+) 1248 WP_049514038.1 EF-P 5-aminopentanol modification-associated protein YfmF -
  FPL13_RS09175 (FPL13_09305) yfmH 1854017..1855312 (+) 1296 WP_049514040.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  FPL13_RS09180 (FPL13_09310) rodZ 1855371..1856192 (+) 822 WP_049514041.1 cytoskeleton protein RodZ -
  FPL13_RS09185 (FPL13_09315) pgsA 1856203..1856742 (+) 540 WP_049514043.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FPL13_RS09190 (FPL13_09320) - 1856744..1857571 (+) 828 WP_049514045.1 energy-coupling factor ABC transporter ATP-binding protein -
  FPL13_RS09195 (FPL13_09325) - 1857556..1858395 (+) 840 WP_049514046.1 energy-coupling factor transporter ATPase -
  FPL13_RS09200 (FPL13_09330) - 1858388..1859182 (+) 795 WP_049514048.1 energy-coupling factor transporter transmembrane component T family protein -
  FPL13_RS09205 (FPL13_09335) - 1859338..1859958 (+) 621 WP_003031567.1 LysM peptidoglycan-binding domain-containing protein -
  FPL13_RS09210 (FPL13_09340) - 1860096..1860752 (-) 657 WP_049514050.1 HAD hydrolase-like protein -
  FPL13_RS09215 (FPL13_09345) sdaAA 1860805..1861677 (-) 873 WP_049514052.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  FPL13_RS09220 (FPL13_09350) sdaAB 1861686..1862357 (-) 672 WP_049514053.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  FPL13_RS09225 (FPL13_09355) - 1862604..1863131 (+) 528 WP_049514055.1 LysM peptidoglycan-binding domain-containing protein -
  FPL13_RS09230 (FPL13_09360) mnmA 1863491..1864613 (+) 1123 Protein_1794 tRNA 2-thiouridine(34) synthase MnmA -
  FPL13_RS09235 (FPL13_09365) mnmG 1864749..1866668 (+) 1920 WP_192208623.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -
  FPL13_RS09240 (FPL13_09370) - 1866917..1868893 (+) 1977 WP_049514061.1 DHH family phosphoesterase -
  FPL13_RS09245 (FPL13_09375) rplI 1868890..1869342 (+) 453 WP_049514062.1 50S ribosomal protein L9 -
  FPL13_RS09250 (FPL13_09380) dnaB 1869374..1870726 (+) 1353 WP_049514064.1 replicative DNA helicase -
  FPL13_RS09255 (FPL13_09385) - 1870730..1871002 (+) 273 WP_003027868.1 Veg family protein -

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41638.61 Da        Isoelectric Point: 9.4264

>NTDB_id=375035 FPL13_RS09080 WP_049512719.1 1835793..1836983(-) (htrA) [Streptococcus sp. KS 6]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTTSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLEANGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRDGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=375035 FPL13_RS09080 WP_049512719.1 1835793..1836983(-) (htrA) [Streptococcus sp. KS 6]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCTATAGGTTTTATTGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAACTAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTAAAAGATGCTGTTGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAACAGTGTGTTTGGAAATGATGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGAGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACCCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGCATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGCAAATTGACTGTTGGTGAGACAGCTATTGCAATTGGAAG
TCCACTTGGTTCAAATTATGCTAATACTGTGACTCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTCTAAAATCTG
AAGACGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATCAACCCAGGGAACTCTGGTGGACCACTTGTG
AATATCCAAGGGCAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAGTTAGAAGCAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTGCGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCTGCTTTATACAAACATTCAATTGGCGACAACATAAAAATCACTTTCTATC
GTGATGGAAAAGAAACTACTACTACCATTAAGCTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7L8W7E4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.561

100

0.765

  htrA Streptococcus mitis NCTC 12261

72.544

100

0.727

  htrA Streptococcus pneumoniae Rx1

72.292

100

0.725

  htrA Streptococcus pneumoniae D39

72.292

100

0.725

  htrA Streptococcus pneumoniae R6

72.292

100

0.725

  htrA Streptococcus pneumoniae TIGR4

72.292

100

0.725

  htrA Streptococcus mutans UA159

55.216

99.242

0.548


Multiple sequence alignment