Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | LPA_RS10455 | Genome accession | NC_014125 |
| Coordinates | 2340576..2340890 (-) | Length | 104 a.a. |
| NCBI ID | WP_011946908.1 | Uniprot ID | A0A378KAB9 |
| Organism | Legionella pneumophila 2300/99 Alcoy | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2335576..2345890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPA_RS10430 (lpa_02907) | - | 2336001..2336501 (-) | 501 | WP_011214243.1 | hypothetical protein | - |
| LPA_RS10435 (lpa_02908) | - | 2336993..2337853 (+) | 861 | WP_013101630.1 | polysaccharide deacetylase family protein | - |
| LPA_RS10440 (lpa_02910) | - | 2337971..2339167 (-) | 1197 | WP_013101631.1 | murein transglycosylase A | - |
| LPA_RS10445 (lpa_02911) | lpp1976 | 2339277..2339834 (-) | 558 | WP_011946906.1 | hypothetical protein | Machinery gene |
| LPA_RS10450 (lpa_02913) | lpp1977 | 2339831..2340637 (-) | 807 | WP_011946907.1 | PilW family protein | Machinery gene |
| LPA_RS10455 (lpa_02914) | lpp1978 | 2340576..2340890 (-) | 315 | WP_011946908.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LPA_RS10460 (lpa_02915) | hisC | 2341050..2342159 (+) | 1110 | WP_011946909.1 | histidinol-phosphate transaminase | - |
| LPA_RS10465 (lpa_02916) | - | 2342196..2342537 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| LPA_RS10475 (lpa_02917) | secF | 2342715..2343632 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| LPA_RS10480 (lpa_02918) | secD | 2343645..2345501 (-) | 1857 | WP_011214250.1 | protein translocase subunit SecD | - |
| LPA_RS10485 (lpa_02919) | yajC | 2345523..2345858 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12203.26 Da Isoelectric Point: 9.8344
>NTDB_id=37148 LPA_RS10455 WP_011946908.1 2340576..2340890(-) (lpp1978) [Legionella pneumophila 2300/99 Alcoy]
MSKHQGFTLMEVLVSLMLMTTVVLTLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPANYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
MSKHQGFTLMEVLVSLMLMTTVVLTLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPANYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
Nucleotide
Download Length: 315 bp
>NTDB_id=37148 LPA_RS10455 WP_011946908.1 2340576..2340890(-) (lpp1978) [Legionella pneumophila 2300/99 Alcoy]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGACGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATTTGGCGAATCCAAGGCTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTGCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAATCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGACGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATTTGGCGAATCCAAGGCTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTGCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAATCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
97.115 |
100 |
0.971 |
| lpp1978 | Legionella pneumophila str. Paris |
95.192 |
100 |
0.952 |