Detailed information NTG0371463

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: IHMA87_RS25635
• Genome accession: NZ_CP041354
• Coordinates: 5320797..5322134 (+)
• Length: 445 a.a.
• NCBI ID: WP_034081443.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain AZPAE15042
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5315797..5327134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHMA87_RS25610 (IHMA87_05003)	pgeF	5315942..5316670 (-)	729	WP_034081438.1	peptidoglycan editing factor PgeF	-
IHMA87_RS25615 (IHMA87_05004)	rluD	5316667..5317629 (-)	963	WP_003150035.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
IHMA87_RS25620 (IHMA87_05005)	-	5317775..5318800 (+)	1026	WP_012077305.1	outer membrane protein assembly factor BamD	-
IHMA87_RS25625 (IHMA87_05006)	-	5318954..5319199 (+)	246	WP_003150030.1	PP0621 family protein	-
IHMA87_RS25630 (IHMA87_05007)	pilS	5319189..5320781 (+)	1593	WP_034081442.1	two-component system sensor histidine kinase PilS	Regulator
IHMA87_RS25635 (IHMA87_05008)	pilR	5320797..5322134 (+)	1338	WP_034081443.1	two-component system response regulator PilR	Regulator
IHMA87_RS25640 (IHMA87_05009)	thiO	5322180..5323274 (-)	1095	WP_033999365.1	glycine oxidase ThiO	-
IHMA87_RS25645 (IHMA87_05010)	-	5323409..5323918 (+)	510	WP_034081444.1	GspH/FimT family protein	-
IHMA87_RS25650 (IHMA87_05011)	-	5324024..5324530 (+)	507	WP_012077308.1	Tfp pilus assembly protein FimT/FimU	-
IHMA87_RS25655 (IHMA87_05012)	pilV	5324521..5325078 (+)	558	WP_034081446.1	type IV pilus modification protein PilV	Machinery gene
IHMA87_RS25660 (IHMA87_05013)	pilW	5325075..5325899 (+)	825	WP_034081447.1	type 4a pilus minor pilin PilW	-
IHMA87_RS25665 (IHMA87_05014)	pilX	5325896..5326483 (+)	588	WP_034081449.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49792.14 Da
• Isoelectric Point: 6.1219

>NTDB_id=371463 IHMA87_RS25635 WP_034081443.1 5320797..5322134(+) (pilR) [Pseudomonas aeruginosa strain AZPAE15042]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEETPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPTELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MPMQVKLLRAIQEKAVRAVGGQQEIGVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCENDQIQPHDLRLADAPGASQDGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=371463 IHMA87_RS25635 WP_034081443.1 5320797..5322134(+) (pilR) [Pseudomonas aeruginosa strain AZPAE15042]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAGCTGCTGGAAATCACCCTCGGCCGCATGAA
GCTGGATACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAACCGTTCGACCTGTGCCTGACCG
ACATGCGCCTGCCGGACGGTAGCGGCCTCGACCTGGTGCAGTACATCCAGCAGCGTCACCCGCAGACCCCGGTCGCCATG
ATCACCGCCTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGCGCCTTCGACTTCCTCACCAAGCCGGTCGA
CCTCGGCCGCCTGCGCGAACTGGTGGCGACCGCCCTGCGCCTGCGCAATCCGGAAGCCGAGGAAACGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCGCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAACTGGTGGCCCGCCTGATCCACGAGCAGGGGCCGCGCATCGAGCGACCGTT
CGTGCCGGTCAACTGCGGCGCGATCCCTACCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACCG
GCGCCATCGAGGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGTACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGCCGATGCAGGTCAAGCTGCTCCGCGCAATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGATCGGCGT
CGACGTCCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAGGTCGGCGCCGGGCGCTTCCGCCAGGATCTCTACT
ACCGCCTCAACGTCATCGAATTGCGCGTTCCGCCCCTGCGCGAACGCCGCGAGGACATCCCGCTGCTGGCCGAGCGCATC
CTCAAGCGCCTGGCCGGCGATACCGGCTTGCCGGCCGCCCGCCTGACCGGCGATGCCCAGGAAAAGCTGAAGAACTATCG
CTTCCCCGGAAACGTGCGTGAACTGGAGAACATGCTGGAGCGCGCCTACACGCTGTGCGAGAACGACCAGATCCAGCCCC
ACGACCTGCGCCTGGCCGACGCGCCGGGCGCCAGCCAGGACGGCGCGGCGAGCCTGAGCGAGATAGACAATCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCTCTCGAGGAGACCCGCTGGAACCGCACTGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGTTCGATGCGTTATCGCCTGAAGAAACTCGGCATAGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	98.427	100	0.984
pilR	Acinetobacter baumannii strain A118	51.416	100	0.53
luxO	Vibrio cholerae strain A1552	38.063	99.775	0.38