Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | IHMA87_RS25655 | Genome accession | NZ_CP041354 |
| Coordinates | 5324521..5325078 (+) | Length | 185 a.a. |
| NCBI ID | WP_034081446.1 | Uniprot ID | E9KTN1 |
| Organism | Pseudomonas aeruginosa strain AZPAE15042 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5319521..5330078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHMA87_RS25635 (IHMA87_05008) | pilR | 5320797..5322134 (+) | 1338 | WP_034081443.1 | two-component system response regulator PilR | Regulator |
| IHMA87_RS25640 (IHMA87_05009) | thiO | 5322180..5323274 (-) | 1095 | WP_033999365.1 | glycine oxidase ThiO | - |
| IHMA87_RS25645 (IHMA87_05010) | - | 5323409..5323918 (+) | 510 | WP_034081444.1 | GspH/FimT family protein | - |
| IHMA87_RS25650 (IHMA87_05011) | - | 5324024..5324530 (+) | 507 | WP_012077308.1 | Tfp pilus assembly protein FimT/FimU | - |
| IHMA87_RS25655 (IHMA87_05012) | pilV | 5324521..5325078 (+) | 558 | WP_034081446.1 | type IV pilus modification protein PilV | Machinery gene |
| IHMA87_RS25660 (IHMA87_05013) | pilW | 5325075..5325899 (+) | 825 | WP_034081447.1 | type 4a pilus minor pilin PilW | - |
| IHMA87_RS25665 (IHMA87_05014) | pilX | 5325896..5326483 (+) | 588 | WP_034081449.1 | type 4a pilus minor pilin PilX | - |
| IHMA87_RS25670 (IHMA87_05015) | pilY1 | 5326495..5329962 (+) | 3468 | WP_034081450.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 19985.21 Da Isoelectric Point: 8.2269
>NTDB_id=371464 IHMA87_RS25655 WP_034081446.1 5324521..5325078(+) (pilV) [Pseudomonas aeruginosa strain AZPAE15042]
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=371464 IHMA87_RS25655 WP_034081446.1 5324521..5325078(+) (pilV) [Pseudomonas aeruginosa strain AZPAE15042]
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATTCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATTCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
90.27 |
100 |
0.903 |