Detailed information NTG0371028

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FK538_RS00955
• Genome accession: NZ_CP041295
• Coordinates: 193108..194463 (-)
• Length: 451 a.a.
• NCBI ID: WP_171526345.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain 80-1-2
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 188108..199463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FK538_RS00940 (FK538_00945)	lptG	189162..190232 (+)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-
FK538_RS00945 (FK538_00950)	gpmI	190351..191898 (+)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
FK538_RS00950 (FK538_00955)	-	191922..193091 (+)	1170	WP_005181572.1	S41 family peptidase	-
FK538_RS00955 (FK538_00960)	pilR	193108..194463 (-)	1356	WP_171526345.1	sigma-54-dependent transcriptional regulator	Regulator
FK538_RS00960 (FK538_00965)	pilS	194535..196103 (-)	1569	WP_168370313.1	sensor histidine kinase	Regulator
FK538_RS00965 (FK538_00970)	-	196118..196753 (-)	636	WP_005181577.1	response regulator	-
FK538_RS00970 (FK538_00975)	-	196971..198053 (+)	1083	WP_127799456.1	serine hydrolase	-
FK538_RS00975 (FK538_00980)	thrC	198146..199291 (-)	1146	WP_005181581.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50603.31 Da
• Isoelectric Point: 6.7145

>NTDB_id=371028 FK538_RS00955 WP_171526345.1 193108..194463(-) (pilR) [Acinetobacter indicus strain 80-1-2]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=371028 FK538_RS00955 WP_171526345.1 193108..194463(-) (pilR) [Acinetobacter indicus strain 80-1-2]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAAGCACGTCAGCTGCTGTCCAG
TCATCACTATGACGCCTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCACTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTACTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTAGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTTCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTAATGGATATTGTGCTGCCACCGCTACGTG
AGCGCGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCCTTACGCAAAATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCTGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGACCCTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.058	100	0.741
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501