Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   FK537_RS07205 Genome accession   NZ_CP041291
Coordinates   1417655..1418797 (+) Length   380 a.a.
NCBI ID   WP_005181456.1    Uniprot ID   A0A7V8P956
Organism   Acinetobacter indicus strain 94-2     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1412655..1423797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FK537_RS07185 (FK537_07260) - 1413217..1415250 (-) 2034 WP_168369816.1 TonB-dependent copper receptor -
  FK537_RS07190 (FK537_07265) - 1415324..1415746 (-) 423 WP_016658991.1 DUF2946 family protein -
  FK537_RS07195 (FK537_07270) def 1415837..1416361 (-) 525 WP_005181462.1 peptide deformylase -
  FK537_RS07200 (FK537_07275) tsaP 1416481..1417638 (+) 1158 WP_163169918.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  FK537_RS07205 (FK537_07280) dprA 1417655..1418797 (+) 1143 WP_005181456.1 DNA-processing protein DprA Machinery gene
  FK537_RS07210 (FK537_07285) - 1418842..1419408 (+) 567 WP_005181449.1 L-threonylcarbamoyladenylate synthase -
  FK537_RS07215 (FK537_07295) - 1419789..1420700 (-) 912 WP_005181447.1 DMT family transporter -
  FK537_RS07220 (FK537_07300) - 1421029..1421571 (+) 543 WP_005181445.1 glutathione peroxidase -
  FK537_RS07225 (FK537_07305) - 1421756..1422364 (+) 609 WP_163146337.1 hypothetical protein -
  FK537_RS07230 (FK537_07310) - 1422485..1423483 (+) 999 WP_168369817.1 pirin family protein -

Sequence


Protein


Download         Length: 380 a.a.        Molecular weight: 42136.98 Da        Isoelectric Point: 6.9756

>NTDB_id=371001 FK537_RS07205 WP_005181456.1 1417655..1418797(+) (dprA) [Acinetobacter indicus strain 94-2]
MLNTISPGHLATIRLWYLVQHSLPSFYKLIRHFGSAAAATEAGNLQRWAELGLHQNHLQRARDFHQAQAQADFQHLLQRV
QQHTDFILIPEDVGYPTQLLPYTDKPPILFGQGQAQPLLQPQVAIVGSRKASPHGRQVAYDFAYYLSEKGFFINSGLAQG
IDEAAHQGGLKHQRTIAVMGTGLDLTYPATHQGLRDQILQRHGTIISEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAT
LDSGSLITAKLAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWLSQQQATLSATASAAAHPT
LPEHLLALYSQLDWVGKNMDQLASELQQETAHLTAQLMELELLGMAMQQSGLYLRCRPSQ

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=371001 FK537_RS07205 WP_005181456.1 1417655..1418797(+) (dprA) [Acinetobacter indicus strain 94-2]
ATGCTGAATACGATATCACCCGGTCATCTCGCAACGATTCGCCTGTGGTATCTGGTTCAGCATTCACTCCCCAGCTTTTA
TAAATTAATCCGGCACTTCGGTTCGGCCGCTGCGGCCACCGAAGCCGGCAACCTGCAGCGCTGGGCAGAACTGGGACTGC
ATCAGAACCATCTGCAACGCGCACGGGATTTTCATCAAGCACAGGCACAAGCCGACTTCCAGCACTTGCTGCAGCGCGTC
CAGCAACATACCGATTTTATTCTTATTCCCGAAGATGTCGGTTACCCCACCCAACTGCTGCCCTATACCGACAAGCCACC
AATTTTATTTGGCCAAGGACAGGCACAACCTTTACTTCAGCCGCAAGTGGCAATTGTCGGCAGTCGCAAAGCCAGTCCGC
ATGGCCGGCAGGTGGCTTATGACTTTGCCTATTATTTAAGTGAAAAAGGCTTTTTTATTAACAGCGGCCTGGCGCAAGGC
ATTGATGAAGCAGCCCATCAGGGTGGCTTGAAACATCAACGTACCATTGCCGTGATGGGTACTGGTCTCGACCTCACCTA
CCCGGCCACACACCAAGGTCTGCGTGACCAGATTCTGCAACGGCATGGCACTATTATCAGTGAGTTCCTGCCACAGACCA
AACCGCTACAGCAGCATTTTCCACGGCGTAACCGCATTGTCAGTGGACTTAGCCTGGGAGTGATTGTAGCCGAAGCCACG
CTGGACAGTGGCTCGCTGATTACCGCCAAACTGGCAGCTGAACAGGGCAAAACCGTGTTTGCCATTCCCGGTCATATCTA
CAGTGAATTTCATCAGGGCTGCCATCAACTGATTCGGGAAGGTGCAATTCTGGTCGATCATCCGGAACAGGTCATTGAAG
ATCTGGCCTTGCCAACCCAATGGCTGAGCCAGCAGCAGGCGACCTTATCCGCTACAGCATCTGCAGCTGCCCACCCGACC
TTACCCGAACATCTGTTGGCCCTATACAGCCAGCTGGACTGGGTCGGTAAAAATATGGACCAGCTGGCCAGCGAACTGCA
ACAGGAAACCGCCCATTTAACCGCGCAGTTAATGGAACTGGAGCTGCTCGGGATGGCAATGCAACAATCGGGGCTATATC
TGCGTTGTCGTCCATCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V8P956

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

69.761

99.211

0.692

  dprA Acinetobacter baumannii D1279779

69.496

99.211

0.689

  dprA Acinetobacter baylyi ADP1

64.211

100

0.642

  dprA Vibrio cholerae strain A1552

42.857

88.421

0.379


Multiple sequence alignment