Detailed information
Bioinformatically predicted
Overview
| Name | htrA | Type | Regulator |
| Locus tag | FHY60_RS18580 | Genome accession | NZ_CP040924 |
| Coordinates | 578548..578694 (+) | Length | 48 a.a. |
| NCBI ID | WP_341472553.1 | Uniprot ID | - |
| Organism | Clostridium thermarum strain SYSU GA15002 | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 573548..583694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FHY60_RS17725 | - | 574701..574805 (-) | 105 | WP_163215706.1 | hypothetical protein | - |
| FHY60_RS02535 | - | 574815..576941 (-) | 2127 | WP_139903073.1 | glycoside hydrolase family 3 C-terminal domain-containing protein | - |
| FHY60_RS02540 | - | 577078..577899 (-) | 822 | WP_139903075.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
| FHY60_RS18215 | - | 577875..578066 (-) | 192 | WP_139903078.1 | hypothetical protein | - |
| FHY60_RS02550 | - | 578000..578362 (-) | 363 | WP_139903081.1 | hypothetical protein | - |
| FHY60_RS18580 | htrA | 578548..578694 (+) | 147 | WP_341472553.1 | trypsin-like peptidase domain-containing protein | Regulator |
| FHY60_RS02585 | - | 579694..581070 (-) | 1377 | WP_139903083.1 | methyl-accepting chemotaxis protein | - |
| FHY60_RS18585 | - | 581200..581811 (-) | 612 | Protein_499 | N-acetylglucosaminidase | - |
| FHY60_RS18590 | - | 581974..582480 (-) | 507 | Protein_500 | LysM peptidoglycan-binding domain-containing protein | - |
Sequence
Protein
Download Length: 48 a.a. Molecular weight: 4986.84 Da Isoelectric Point: 6.1492
>NTDB_id=368341 FHY60_RS18580 WP_341472553.1 578548..578694(+) (htrA) [Clostridium thermarum strain SYSU GA15002]
MSAKLIRKDAKTDLAVLKIEASDLTTAVYGDSSKLVVGELAVAIGNPL
MSAKLIRKDAKTDLAVLKIEASDLTTAVYGDSSKLVVGELAVAIGNPL
Nucleotide
Download Length: 147 bp
>NTDB_id=368341 FHY60_RS18580 WP_341472553.1 578548..578694(+) (htrA) [Clostridium thermarum strain SYSU GA15002]
ATATCAGCAAAGTTAATACGTAAAGATGCCAAAACCGATCTGGCAGTTTTAAAAATAGAAGCTTCAGACTTAACAACTGC
AGTTTATGGGGATTCTTCTAAATTAGTTGTTGGCGAGCTTGCTGTAGCTATAGGTAATCCACTATAG
ATATCAGCAAAGTTAATACGTAAAGATGCCAAAACCGATCTGGCAGTTTTAAAAATAGAAGCTTCAGACTTAACAACTGC
AGTTTATGGGGATTCTTCTAAATTAGTTGTTGGCGAGCTTGCTGTAGCTATAGGTAATCCACTATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| htrA | Streptococcus pneumoniae R6 |
51.064 |
97.917 |
0.5 |
| htrA | Streptococcus pneumoniae Rx1 |
51.064 |
97.917 |
0.5 |
| htrA | Streptococcus pneumoniae D39 |
51.064 |
97.917 |
0.5 |
| htrA | Streptococcus mitis NCTC 12261 |
51.064 |
97.917 |
0.5 |
| htrA | Streptococcus pneumoniae TIGR4 |
51.064 |
97.917 |
0.5 |
| htrA | Streptococcus mutans UA159 |
48.936 |
97.917 |
0.479 |
| htrA | Streptococcus gordonii str. Challis substr. CH1 |
44.681 |
97.917 |
0.438 |