Detailed information NTG0368310

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: GZS07_RS22155
• Genome accession: NZ_CP048367
• Coordinates: 4628151..4629176 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 164
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4623151..4634176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GZS07_RS22135 (GZS08_22130)	metJ	4624212..4624529 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
GZS07_RS22140 (GZS08_22135)	yiiX	4624713..4625321 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
GZS07_RS22145 (GZS08_22140)	rpmE	4625382..4625594 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
GZS07_RS22150 (GZS08_22145)	priA	4625797..4627995 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
GZS07_RS22155 (GZS08_22150)	cytR	4628151..4629176 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
GZS07_RS22160 (GZS08_22155)	ftsN	4629268..4630227 (+)	960	WP_000068828.1	cell division protein FtsN	-
GZS07_RS22165 (GZS08_22160)	hslV	4630320..4630850 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
GZS07_RS22170 (GZS08_22165)	hslU	4630860..4632191 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
GZS07_RS22175 (GZS08_22170)	menA	4632258..4633184 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
GZS07_RS22180 (GZS08_22175)	rraA	4633277..4633762 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
GZS07_RS22185 (GZS08_22180)	zapB	4633847..4634092 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=368310 GZS07_RS22155 WP_000644904.1 4628151..4629176(+) (cytR) [Escherichia coli strain 164]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=368310 GZS07_RS22155 WP_000644904.1 4628151..4629176(+) (cytR) [Escherichia coli strain 164]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628