Detailed information NTG0367741

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: FEE42_RS10770
• Genome accession: NZ_CP040863
• Coordinates: 2185744..2186865 (+)
• Length: 373 a.a.
• NCBI ID: WP_164028542.1
• Uniprot ID: -
• Organism: Rodentibacter caecimuris strain G1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2180744..2191865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FEE42_RS10760 (FEE42_10800)	leuB	2182050..2183126 (-)	1077	WP_164028538.1	3-isopropylmalate dehydrogenase	-
FEE42_RS10765 (FEE42_10810)	leuA	2183667..2185214 (-)	1548	WP_164028540.1	2-isopropylmalate synthase	-
FEE42_RS10770 (FEE42_10815)	dprA	2185744..2186865 (+)	1122	WP_164028542.1	DNA-processing protein DprA	Machinery gene
FEE42_RS10775 (FEE42_10820)	yaaA	2186908..2187684 (+)	777	WP_164028544.1	peroxide stress protein YaaA	-
FEE42_RS10780 (FEE42_10825)	-	2187677..2188258 (+)	582	WP_164028546.1	hypothetical protein	-
FEE42_RS10785 (FEE42_10830)	pfkA	2188384..2189349 (+)	966	WP_059367579.1	6-phosphofructokinase	-
FEE42_RS10790 (FEE42_10835)	yceD	2189522..2190046 (+)	525	WP_164028548.1	23S rRNA accumulation protein YceD	-
FEE42_RS10795 (FEE42_10840)	rpmF	2190074..2190244 (+)	171	WP_005544470.1	50S ribosomal protein L32	-
FEE42_RS10800 (FEE42_10845)	plsX	2190266..2191285 (+)	1020	WP_164028550.1	phosphate acyltransferase PlsX	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41887.07 Da
• Isoelectric Point: 5.8830

>NTDB_id=367741 FEE42_RS10770 WP_164028542.1 2185744..2186865(+) (dprA) [Rodentibacter caecimuris strain G1]
MEHINETLLRLMQIPKLGGVAINKILSAMTLDDLVNADENVFRQMGWGAIQIRRWFKPEKKFMESALLWAEKEGNHLVNY
FSPFYPFLLKQIGSFPPILFVKGNVTAISQRQMAVVGSRYCSSYGEYWAKYFATELSFAGFTITSGLALGIDGYCHQAVV
DVKGQTIAVLGSGLEEVYPANNRRLAEQILENNGALVSEFMPNQPPIATNFPRRNRIISGLSVGTLIVEATEKSGSLITA
RYALEQNREIFAIPGNIQSEFSQGCNRLIKQGAMLVENVKDILEALHQHSLHSQTEIDFSQIESENYKPPLYSHRLIEAP
SHPKLYARIGYTPVSIDDLAQEFGFSVEVLLVQLLDLELQDLILNENGLYKRV

Nucleotide

• Length: 1122 bp

>NTDB_id=367741 FEE42_RS10770 WP_164028542.1 2185744..2186865(+) (dprA) [Rodentibacter caecimuris strain G1]
ATGGAACATATTAATGAAACTTTACTTCGTTTGATGCAAATACCTAAATTAGGCGGTGTGGCGATTAATAAAATTCTGTC
AGCCATGACATTAGATGACTTGGTAAACGCAGATGAAAACGTTTTTCGCCAAATGGGATGGGGGGCGATTCAGATTCGTC
GTTGGTTTAAACCAGAAAAAAAATTTATGGAATCGGCTCTCCTTTGGGCGGAAAAAGAAGGAAATCATTTGGTGAACTAT
TTTTCTCCCTTTTATCCTTTTTTGTTAAAACAAATTGGAAGTTTTCCCCCTATCTTGTTTGTTAAGGGAAATGTAACGGC
AATTTCTCAGCGCCAAATGGCTGTGGTAGGCAGTCGCTATTGTTCGTCTTACGGAGAATATTGGGCAAAGTATTTTGCTA
CAGAACTCTCTTTTGCCGGTTTTACCATTACAAGCGGATTGGCATTAGGTATTGACGGATATTGTCATCAAGCGGTGGTG
GATGTAAAAGGACAGACCATTGCTGTTTTAGGGAGCGGATTAGAGGAAGTTTATCCGGCAAATAATCGACGGCTTGCTGA
ACAAATTTTAGAAAACAATGGGGCGTTGGTTTCGGAATTTATGCCAAACCAGCCTCCGATTGCAACAAATTTTCCCCGTC
GTAATCGTATTATTAGCGGTCTTTCTGTGGGGACGTTGATAGTTGAAGCCACTGAAAAAAGCGGTTCGTTAATTACAGCA
CGTTATGCGTTGGAACAAAATCGGGAAATTTTCGCCATACCCGGCAATATTCAAAGTGAGTTTAGTCAAGGGTGTAATCG
TTTGATTAAGCAAGGGGCTATGTTGGTAGAAAATGTGAAAGATATTTTAGAAGCCTTGCATCAACATTCTCTCCATAGCC
AAACAGAGATTGATTTTAGTCAGATTGAAAGCGAAAATTATAAGCCACCTTTGTATTCTCATCGGTTAATTGAAGCACCA
AGCCATCCGAAACTTTATGCGAGAATTGGTTATACTCCGGTGAGTATTGATGATCTTGCTCAAGAGTTTGGTTTTAGTGT
AGAGGTATTGTTGGTGCAACTTTTAGATTTGGAATTACAGGATTTGATTCTCAATGAAAATGGACTTTATAAACGAGTGT
AG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (320-364)

• DNA recombination-mediator protein A (DNA_processg_A) (70-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	79.625	100	0.796
dprA	Glaesserella parasuis strain SC1401	51.136	94.37	0.483
dprA	Vibrio campbellii strain DS40M4	43.443	98.123	0.426
dprA	Vibrio cholerae strain A1552	43.443	98.123	0.426
dprA	Legionella pneumophila strain ERS1305867	42.378	87.936	0.373
dprA	Acinetobacter baylyi ADP1	40.118	90.885	0.365