Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SMUNN2025_RS09770 Genome accession   NC_013928
Coordinates   2011123..2012331 (+) Length   402 a.a.
NCBI ID   WP_012997995.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2006123..2017331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS09760 (SmuNN2025_1892) - 2009424..2010086 (-) 663 WP_002262652.1 YoaK family protein -
  SMUNN2025_RS09765 (SmuNN2025_1893) rlmH 2010438..2010917 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SMUNN2025_RS09770 (SmuNN2025_1894) htrA 2011123..2012331 (+) 1209 WP_012997995.1 S1C family serine protease Regulator
  SMUNN2025_RS09775 (SmuNN2025_1895) spo0J 2012809..2013579 (+) 771 WP_002269456.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 402 a.a.        Molecular weight: 43098.57 Da        Isoelectric Point: 8.8092

>NTDB_id=36623 SMUNN2025_RS09770 WP_012997995.1 2011123..2012331(+) (htrA) [Streptococcus mutans NN2025]
MNNTKSHPFLKWFIPFLVIFLTFILGVISTLTFNWITGNKSFSNNGKTTVSNVIYDTKSNTTKAVKNVKNTVVSVINYQK
TDNNYYNYDSGSQEKNKSEDGLGVYGEGSGVIYKKDGDSAYLVTNNHVVKDAEKLEIMMANGKKVVGKLVGSDTYSDLAV
IKISSKYVTTVAEFANSDKIKVGEPAIAIGSPLGSDYANSVTEGIVSSLSRTVTSQNENGETISTNAIQTDAAINPGNSG
GALINIKGQVIGINSSKIASSNNSNSGVAVEGMGFAIPSNDVVSIINQLEENGEVVRPALGISMANLSEASTSGRDTLKI
PSDVTSGIVVLSTQSGMPADGKLKKYDVITEIDGKKVASISDLQSILYKHKKGDKIKLTFYREKDKQTVEIQLTKTSQDL
NH

Nucleotide


Download         Length: 1209 bp        

>NTDB_id=36623 SMUNN2025_RS09770 WP_012997995.1 2011123..2012331(+) (htrA) [Streptococcus mutans NN2025]
GTGAATAATACGAAATCTCACCCTTTTTTAAAATGGTTTATACCTTTTTTAGTTATTTTTTTAACTTTTATTTTAGGGGT
CATATCAACACTTACCTTTAATTGGATAACTGGTAACAAATCGTTTTCTAACAATGGAAAAACAACTGTTAGTAATGTCA
TTTATGATACCAAATCTAACACTACCAAGGCTGTTAAAAATGTCAAAAATACAGTTGTATCTGTCATCAATTATCAAAAA
ACAGATAATAATTATTACAATTATGACAGCGGTTCTCAAGAAAAAAATAAATCAGAGGATGGTCTAGGAGTCTACGGTGA
AGGTTCTGGTGTTATCTACAAAAAAGATGGCGATAGTGCTTATTTAGTCACAAACAATCATGTCGTTAAAGATGCAGAAA
AGTTAGAAATCATGATGGCTAATGGTAAAAAAGTTGTCGGTAAATTAGTAGGTTCTGATACTTATTCTGATCTGGCTGTT
ATTAAAATTTCTTCTAAGTATGTTACGACAGTTGCTGAATTTGCTAATTCGGATAAAATAAAAGTTGGAGAACCAGCAAT
CGCTATTGGTAGCCCTTTAGGCAGTGATTATGCTAATTCTGTAACAGAAGGAATTGTTTCAAGTCTCAGTCGTACAGTAA
CTTCACAAAATGAAAATGGCGAAACAATTTCAACTAATGCTATTCAAACAGATGCAGCTATTAACCCTGGTAATTCTGGT
GGCGCTTTAATTAATATCAAAGGACAAGTTATTGGTATCAATTCAAGTAAAATTGCATCAAGTAATAACTCAAATAGTGG
CGTTGCTGTTGAAGGAATGGGCTTTGCAATTCCTTCAAACGATGTTGTCTCTATTATTAATCAATTAGAAGAAAATGGTG
AAGTTGTTAGACCCGCTCTTGGTATTTCAATGGCTAATCTTAGTGAAGCTTCAACAAGTGGAAGAGATACTTTAAAAATA
CCAAGTGATGTCACAAGCGGTATTGTTGTTCTTTCAACACAAAGTGGTATGCCAGCAGATGGGAAGCTGAAGAAATATGA
TGTCATTACAGAAATTGATGGGAAGAAGGTAGCGTCTATCAGCGATCTTCAAAGTATTCTTTACAAACACAAAAAGGGAG
ATAAAATTAAACTCACTTTCTATCGCGAAAAAGATAAACAAACAGTTGAGATCCAATTAACTAAAACAAGTCAAGATTTG
AATCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

99.751

100

0.998

  htrA Streptococcus gordonii str. Challis substr. CH1

55.89

99.254

0.555

  htrA Streptococcus mitis NCTC 12261

54.545

98.507

0.537

  htrA Streptococcus pneumoniae Rx1

54.177

98.259

0.532

  htrA Streptococcus pneumoniae D39

54.177

98.259

0.532

  htrA Streptococcus pneumoniae R6

54.177

98.259

0.532

  htrA Streptococcus pneumoniae TIGR4

54.177

98.259

0.532


Multiple sequence alignment