Detailed information NTG0365464

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: LROSL1_RS10685
• Genome accession: NZ_CP040586
• Coordinates: 2206468..2208642 (-)
• Length: 724 a.a.
• NCBI ID: WP_178914546.1
• Uniprot ID: -
• Organism: Furfurilactobacillus rossiae strain L1
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 2201468..2213642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LROSL1_RS10660 (LROSL1_2055)	-	2202644..2202970 (-)	327	WP_178914542.1	type II toxin-antitoxin system RelE/ParE family toxin	-
LROSL1_RS10665 (LROSL1_2056)	-	2202967..2203230 (-)	264	WP_161003553.1	type II toxin-antitoxin system prevent-host-death family antitoxin	-
LROSL1_RS10670 (LROSL1_2057)	-	2203309..2203908 (-)	600	WP_178914543.1	DJ-1/PfpI family protein	-
LROSL1_RS10675 (LROSL1_2058)	-	2203932..2204414 (-)	483	WP_178914544.1	GNAT family N-acetyltransferase	-
LROSL1_RS10680 (LROSL1_2059)	-	2204431..2205261 (-)	831	WP_178914545.1	DUF2785 domain-containing protein	-
LROSL1_RS13245 (LROSL1_2061)	-	2206158..2206280 (-)	123	WP_263863238.1	hypothetical protein	-
LROSL1_RS10685 (LROSL1_2062)	comA	2206468..2208642 (-)	2175	WP_178914546.1	peptide cleavage/export ABC transporter	Regulator
LROSL1_RS10690 (LROSL1_2063)	-	2208758..2210539 (-)	1782	WP_178914547.1	oligopeptide ABC transporter substrate-binding protein	-
LROSL1_RS10695 (LROSL1_2064)	-	2210664..2211611 (-)	948	WP_178914548.1	ABC transporter permease	-
LROSL1_RS10700 (LROSL1_2065)	-	2211627..2212586 (-)	960	WP_178914549.1	ABC transporter permease	-
LROSL1_RS10705 (LROSL1_2066)	-	2212588..2213541 (-)	954	WP_178914550.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 724 a.a.
• Molecular weight: 81197.87 Da
• Isoelectric Point: 8.2731

>NTDB_id=365464 LROSL1_RS10685 WP_178914546.1 2206468..2208642(-) (comA) [Furfurilactobacillus rossiae strain L1]
MLDLLKDKKFYVAQVDERDCGVAALSMILKYFKSYVSIAHLRDLAKTSMEGTSLLGITTAAGCFGLNTTAVQADMSLFDM
SDVPYPFIAHVNVHENLQHFYTVFGVSGNQVIVGDPNPSVGMIKMRKEQFAKEWDGYSVFFEQSGDYEIIRDKKHTLWEL
VPILNRQHILVSQIILYSLLVTSVSILGSYYLQFLIDKLIPRKQLTLLEIISMGLIVAYVVQQLLSFLQNYLMALMSKRL
STDIILKYIQHLFELPMNFFATRRIGEIVSRFTDANQIIDALANTITTVILDVGIVVVMGSVLIFQNIKLFLISMVAIPF
YMLIVFGFVRCFNHLNNERMQSNSMLSSSIIEDLDGIETIKSLNSEGASFSKIKHEFTKLLNQTFSYQVTTFIQNSLKSC
LQLLLSVCVLWFGSILVMRGNMSIGSLITFNALLIYFTAPLESIINLQTKLQTARVANNRLNEVYLVKSEFKKQSAFQTN
VKKLELSDIFLSHVRFRYGLMSYALDDISLVIPAGSKVALVGVSGSGKSTLVKLLTRFYEPETGQVFLGKKDLKDISKKA
LRATVNYLPQDPYIFTGSIEDNLMLGHSTDSITSETVIRALKTADIYEDIEKMPLKIKTEITSDGGGLSGGQRQRIAIAR
AVLADSPIMILDESTSNLDVITEKKVISNLLNLEDKTIIFVAHRLAIAERVEQIVVMKNGKIIENGTHQSLRGKNGYYAE
LLNA

Nucleotide

• Length: 2175 bp

>NTDB_id=365464 LROSL1_RS10685 WP_178914546.1 2206468..2208642(-) (comA) [Furfurilactobacillus rossiae strain L1]
ATGCTTGATCTTTTAAAAGACAAAAAGTTTTATGTGGCACAAGTAGACGAACGTGACTGTGGTGTTGCTGCCCTTTCAAT
GATATTGAAATATTTTAAATCGTATGTTTCAATAGCCCACTTAAGAGATCTGGCTAAGACTAGTATGGAAGGTACAAGTT
TGCTGGGAATTACGACAGCAGCAGGGTGCTTCGGTCTAAATACAACGGCAGTACAAGCAGATATGTCATTGTTTGATATG
AGTGATGTTCCATATCCATTTATTGCGCATGTGAACGTTCATGAAAACCTTCAACATTTTTATACAGTTTTTGGGGTTTC
CGGAAATCAAGTGATTGTGGGTGATCCCAATCCGTCTGTTGGTATGATTAAAATGAGAAAGGAACAGTTTGCAAAAGAGT
GGGATGGATACAGTGTTTTCTTCGAACAAAGTGGTGATTATGAAATTATTCGAGACAAAAAGCATACACTATGGGAACTA
GTTCCAATCTTAAACAGACAACATATTTTAGTTTCACAAATTATTTTATATTCACTATTAGTTACTTCAGTTAGTATTCT
CGGATCATATTACCTACAATTTTTAATTGATAAATTAATTCCGAGAAAACAACTTACTTTGCTTGAAATTATTTCAATGG
GCTTGATAGTTGCCTATGTAGTTCAGCAATTGTTATCATTTCTACAAAATTATTTAATGGCTCTGATGAGTAAAAGGCTT
TCCACGGACATAATTTTGAAATATATACAACATCTATTTGAATTACCAATGAACTTTTTTGCGACAAGAAGAATTGGTGA
AATTGTGTCTCGCTTTACAGATGCTAATCAAATTATTGACGCTTTAGCAAATACAATAACGACAGTCATTTTGGATGTTG
GTATCGTTGTTGTAATGGGCAGTGTTTTAATTTTTCAAAACATTAAATTGTTTTTGATATCGATGGTTGCTATTCCCTTT
TATATGCTTATTGTTTTTGGATTCGTTAGATGCTTTAACCACCTGAATAATGAAAGAATGCAGTCAAATTCAATGCTGAG
TTCATCGATTATTGAGGATTTGGATGGCATTGAAACAATTAAATCCTTAAACAGCGAAGGTGCTTCCTTTTCTAAAATAA
AACACGAGTTTACGAAATTGTTAAACCAAACATTTTCTTATCAAGTAACGACCTTTATTCAGAATAGTTTAAAGTCTTGT
TTGCAACTTTTATTAAGCGTTTGTGTTTTGTGGTTTGGATCGATTTTAGTGATGAGAGGAAATATGTCAATAGGTTCGTT
AATTACGTTTAATGCATTGTTAATTTACTTTACAGCACCGTTGGAATCTATTATTAATTTACAGACAAAACTTCAAACGG
CTAGAGTAGCAAACAATCGCCTAAACGAAGTGTACTTAGTGAAATCAGAATTCAAGAAACAAAGCGCTTTTCAGACCAAT
GTGAAAAAGTTGGAGTTAAGCGACATCTTTTTGAGCCATGTTAGATTTCGGTATGGATTAATGAGTTATGCATTAGATGA
CATCAGTTTAGTAATTCCGGCTGGGAGCAAGGTTGCTTTGGTTGGTGTAAGCGGTTCTGGAAAATCAACTTTGGTAAAGC
TTCTTACAAGATTTTACGAACCAGAAACAGGACAAGTTTTTTTAGGAAAAAAAGATTTAAAGGATATTAGTAAAAAGGCG
TTAAGAGCAACAGTAAACTATTTACCACAAGATCCGTATATTTTTACAGGATCTATTGAAGACAACTTGATGTTGGGGCA
TTCGACAGACTCAATAACAAGTGAGACGGTGATACGGGCTTTAAAAACAGCAGATATATATGAGGATATTGAGAAAATGC
CTTTGAAGATAAAAACTGAGATTACCTCAGATGGTGGAGGACTGTCTGGAGGGCAACGACAAAGAATTGCTATTGCAAGA
GCGGTCCTTGCCGATTCGCCAATTATGATTCTAGATGAATCAACGAGCAATCTTGACGTAATTACTGAAAAAAAAGTTAT
TTCGAATCTTTTGAATTTAGAGGATAAAACAATTATTTTCGTAGCTCATAGATTGGCGATTGCTGAAAGGGTTGAACAAA
TAGTAGTCATGAAGAATGGAAAAATTATAGAAAATGGAACGCATCAGTCTCTGAGAGGTAAAAATGGATATTACGCCGAA
TTATTAAATGCTTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (11-143)

• ABC transporter (ABC_tran) (505-656)

• ABC transporter transmembrane region (ABC_membrane) (174-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	52.295	99.309	0.519
comA	Streptococcus mitis SK321	52.017	99.309	0.517
comA	Streptococcus gordonii str. Challis substr. CH1	51.314	99.862	0.512
comA	Streptococcus pneumoniae R6	51.46	99.309	0.511
comA	Streptococcus pneumoniae Rx1	51.46	99.309	0.511
comA	Streptococcus pneumoniae D39	51.46	99.309	0.511
comA	Streptococcus pneumoniae TIGR4	51.321	99.309	0.51
comA/nlmT	Streptococcus mutans UA159	50.702	98.343	0.499