Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | FE323_RS00395 | Genome accession | NZ_CP040422 |
| Coordinates | 75428..75619 (+) | Length | 63 a.a. |
| NCBI ID | WP_208959450.1 | Uniprot ID | - |
| Organism | Dolosigranulum pigrum strain KPL3050 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 70428..80619
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE323_RS00365 (FE323_00370) | - | 70935..71891 (+) | 957 | WP_111949636.1 | ABC transporter permease | - |
| FE323_RS00370 (FE323_00375) | - | 71895..72725 (+) | 831 | WP_111949638.1 | ABC transporter permease | - |
| FE323_RS00375 (FE323_00380) | - | 72728..73699 (+) | 972 | WP_143332989.1 | ABC transporter ATP-binding protein | - |
| FE323_RS00380 (FE323_00385) | - | 73696..74451 (+) | 756 | WP_208955978.1 | ATP-binding cassette domain-containing protein | - |
| FE323_RS09500 | - | 74652..74777 (+) | 126 | Protein_77 | IS3 family transposase | - |
| FE323_RS00390 (FE323_00395) | - | 75101..75328 (+) | 228 | WP_208954292.1 | hypothetical protein | - |
| FE323_RS00395 (FE323_00400) | comA | 75428..75619 (+) | 192 | WP_208959450.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| FE323_RS00400 (FE323_00405) | - | 75815..76933 (+) | 1119 | WP_077863082.1 | hypothetical protein | - |
| FE323_RS00405 (FE323_00410) | - | 77006..78151 (+) | 1146 | WP_208959451.1 | exonuclease SbcCD subunit D | - |
Sequence
Protein
Download Length: 63 a.a. Molecular weight: 7001.25 Da Isoelectric Point: 9.8486
>NTDB_id=364200 FE323_RS00395 WP_208959450.1 75428..75619(+) (comA) [Dolosigranulum pigrum strain KPL3050]
MIFRKYKYRSQINEKDCGVAALGMILDNYGIDVSASRIIYLTKTTQDGITMLGLSKAAQKLAL
MIFRKYKYRSQINEKDCGVAALGMILDNYGIDVSASRIIYLTKTTQDGITMLGLSKAAQKLAL
Nucleotide
Download Length: 192 bp
>NTDB_id=364200 FE323_RS00395 WP_208959450.1 75428..75619(+) (comA) [Dolosigranulum pigrum strain KPL3050]
GTGATTTTTAGAAAGTATAAATATAGATCTCAAATTAATGAAAAAGATTGCGGAGTTGCGGCTCTAGGTATGATTTTAGA
TAATTATGGTATAGATGTGTCCGCATCAAGAATAATATATTTAACTAAAACTACACAGGACGGCATTACAATGTTAGGAT
TATCTAAAGCAGCGCAAAAATTAGCTTTGTGA
GTGATTTTTAGAAAGTATAAATATAGATCTCAAATTAATGAAAAAGATTGCGGAGTTGCGGCTCTAGGTATGATTTTAGA
TAATTATGGTATAGATGTGTCCGCATCAAGAATAATATATTTAACTAAAACTACACAGGACGGCATTACAATGTTAGGAT
TATCTAAAGCAGCGCAAAAATTAGCTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
50.82 |
96.825 |
0.492 |
| comA | Streptococcus mitis SK321 |
44.444 |
100 |
0.444 |
| comA | Streptococcus mitis NCTC 12261 |
44.444 |
100 |
0.444 |
| comA | Streptococcus pneumoniae Rx1 |
42.857 |
100 |
0.429 |
| comA | Streptococcus pneumoniae D39 |
42.857 |
100 |
0.429 |
| comA | Streptococcus pneumoniae R6 |
42.857 |
100 |
0.429 |
| comA | Streptococcus pneumoniae TIGR4 |
42.857 |
100 |
0.429 |
| comA/nlmT | Streptococcus mutans UA159 |
40 |
95.238 |
0.381 |