Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | SMI_RS00105 | Genome accession | NC_013853 |
| Coordinates | 22057..22293 (+) | Length | 78 a.a. |
| NCBI ID | WP_000941921.1 | Uniprot ID | D3H631 |
| Organism | Streptococcus mitis B6 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 17057..27293
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMI_RS00105 (smi_0021) | comW | 22057..22293 (+) | 237 | WP_000941921.1 | sigma(X)-activator ComW | Regulator |
| SMI_RS00110 (smi_0022) | - | 22524..23810 (+) | 1287 | WP_012972411.1 | adenylosuccinate synthase | - |
| SMI_RS00115 (smi_0024) | tadA | 24011..24478 (+) | 468 | WP_000386764.1 | tRNA adenosine(34) deaminase TadA | - |
| SMI_RS00125 (smi_0026) | - | 24665..25108 (+) | 444 | WP_000701987.1 | dUTP diphosphatase | - |
| SMI_RS00130 (smi_0027) | - | 25110..25649 (+) | 540 | WP_000691251.1 | histidine phosphatase family protein | - |
| SMI_RS00135 (smi_0028) | radA | 25663..27024 (+) | 1362 | WP_164925536.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9935.56 Da Isoelectric Point: 7.2695
>NTDB_id=36279 SMI_RS00105 WP_000941921.1 22057..22293(+) (comW) [Streptococcus mitis B6]
MLQSIYDQMMDFYRNIEEEYGMFFGDNFDWEHVHFKFLIYYLVRYRIVSRRDFIVYHYRVAYRLYLEKLIMKQGFVAC
MLQSIYDQMMDFYRNIEEEYGMFFGDNFDWEHVHFKFLIYYLVRYRIVSRRDFIVYHYRVAYRLYLEKLIMKQGFVAC
Nucleotide
Download Length: 237 bp
>NTDB_id=36279 SMI_RS00105 WP_000941921.1 22057..22293(+) (comW) [Streptococcus mitis B6]
ATGCTACAAAGTATTTATGATCAGATGATGGATTTTTATAGAAATATTGAAGAAGAGTATGGTATGTTCTTCGGTGATAA
TTTTGATTGGGAACATGTTCATTTTAAGTTTTTGATTTATTATCTTGTCCGATATCGTATTGTGAGTCGTCGGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGATAATGAAACAAGGTTTTGTTGCTTGTTGA
ATGCTACAAAGTATTTATGATCAGATGATGGATTTTTATAGAAATATTGAAGAAGAGTATGGTATGTTCTTCGGTGATAA
TTTTGATTGGGAACATGTTCATTTTAAGTTTTTGATTTATTATCTTGTCCGATATCGTATTGTGAGTCGTCGGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGATAATGAAACAAGGTTTTGTTGCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus mitis SK321 |
97.436 |
100 |
0.974 |
| comW | Streptococcus mitis NCTC 12261 |
97.403 |
98.718 |
0.962 |
| comW | Streptococcus pneumoniae Rx1 |
78.205 |
100 |
0.782 |
| comW | Streptococcus pneumoniae D39 |
78.205 |
100 |
0.782 |
| comW | Streptococcus pneumoniae R6 |
78.205 |
100 |
0.782 |
| comW | Streptococcus pneumoniae TIGR4 |
78.205 |
100 |
0.782 |