Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FD735_RS09795 Genome accession   NZ_CP040231
Coordinates   1897551..1898309 (+) Length   252 a.a.
NCBI ID   WP_139659087.1    Uniprot ID   A0A5B7Y933
Organism   Streptococcus sp. 1643     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1892551..1903309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS09765 (FD735_09765) comE 1893136..1893888 (-) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator
  FD735_RS09770 (FD735_09770) comD 1893885..1895204 (-) 1320 WP_139659086.1 competence system sensor histidine kinase ComD Regulator
  FD735_RS09775 (FD735_09775) comC/comC2 1895225..1895350 (-) 126 WP_000799678.1 competence-stimulating peptide ComC Regulator
  FD735_RS09785 (FD735_09785) rlmH 1895632..1896111 (-) 480 WP_070569604.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FD735_RS09790 (FD735_09790) htrA 1896297..1897493 (+) 1197 WP_070569607.1 S1C family serine protease Regulator
  FD735_RS09795 (FD735_09795) spo0J 1897551..1898309 (+) 759 WP_139659087.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29062.57 Da        Isoelectric Point: 8.9994

>NTDB_id=362682 FD735_RS09795 WP_139659087.1 1897551..1898309(+) (spo0J) [Streptococcus sp. 1643]
MEKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMIIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYNRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=362682 FD735_RS09795 WP_139659087.1 1897551..1898309(+) (spo0J) [Streptococcus sp. 1643]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGAAAAGAATTTGATGTAGAAAA
ATTAAAGGAATTGGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTAGCTGGTCTGACCTCTATCCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATAATTCAGTCTATCATTGAGAATTTACAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCAGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTACTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTGGACAAAGAGCAGCAAGACTATTTCTTTCAACTAATTAAAAATGAAGACATCTCTGTGAGAAA
GCTAGAAGCACTTCTTACAGAGAAAAAACACAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAGATAAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACAATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B7Y933

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment