Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | FAH66_RS09950 | Genome accession | NZ_CP039887 |
| Coordinates | 2036334..2036621 (+) | Length | 95 a.a. |
| NCBI ID | WP_036472233.1 | Uniprot ID | A0A4D7WS56 |
| Organism | Neisseria subflava strain ATCC 49275 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2031334..2041621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAH66_RS09930 (FAH66_09930) | gltS | 2032055..2033269 (-) | 1215 | WP_137041460.1 | sodium/glutamate symporter | - |
| FAH66_RS09940 (FAH66_09940) | - | 2033487..2034893 (-) | 1407 | WP_137041462.1 | tetratricopeptide repeat protein | - |
| FAH66_RS09945 (FAH66_09945) | - | 2035248..2036054 (-) | 807 | WP_137041463.1 | integrase core domain-containing protein | - |
| FAH66_RS09950 (FAH66_09950) | comE | 2036334..2036621 (+) | 288 | WP_036472233.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| FAH66_RS09955 (FAH66_09955) | comP | 2036805..2037299 (+) | 495 | WP_167480347.1 | type IV pilin protein | Machinery gene |
| FAH66_RS09960 (FAH66_09960) | uvrB | 2037554..2039578 (+) | 2025 | WP_137041464.1 | excinuclease ABC subunit UvrB | - |
| FAH66_RS09965 (FAH66_09965) | - | 2039624..2040259 (+) | 636 | WP_039405269.1 | HEPN domain-containing protein | - |
| FAH66_RS09970 (FAH66_09970) | xth | 2040508..2041278 (-) | 771 | WP_137041465.1 | exodeoxyribonuclease III | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 9763.42 Da Isoelectric Point: 10.4923
>NTDB_id=360959 FAH66_RS09950 WP_036472233.1 2036334..2036621(+) (comE) [Neisseria subflava strain ATCC 49275]
MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEELKNVKGIGDAVLNKLKAEAT
VSSAAPKAAQPAVKK
MKKFLFGAFAAVCAAFSLAAVNINTASSAELEALPGIGPAKAKSIVEYRQKNGAFKSVEELKNVKGIGDAVLNKLKAEAT
VSSAAPKAAQPAVKK
Nucleotide
Download Length: 288 bp
>NTDB_id=360959 FAH66_RS09950 WP_036472233.1 2036334..2036621(+) (comE) [Neisseria subflava strain ATCC 49275]
ATGAAGAAATTTTTATTTGGTGCATTTGCCGCCGTCTGTGCGGCGTTCTCTTTGGCTGCCGTGAACATCAATACCGCGTC
TTCTGCCGAACTGGAGGCCTTGCCGGGTATCGGCCCGGCTAAGGCGAAATCGATTGTGGAATACCGTCAGAAGAACGGTG
CGTTCAAATCGGTGGAGGAGCTGAAAAACGTGAAGGGCATCGGTGATGCGGTGCTGAACAAGTTGAAGGCGGAGGCGACG
GTTTCTTCTGCCGCGCCTAAGGCCGCACAGCCTGCCGTGAAAAAATAA
ATGAAGAAATTTTTATTTGGTGCATTTGCCGCCGTCTGTGCGGCGTTCTCTTTGGCTGCCGTGAACATCAATACCGCGTC
TTCTGCCGAACTGGAGGCCTTGCCGGGTATCGGCCCGGCTAAGGCGAAATCGATTGTGGAATACCGTCAGAAGAACGGTG
CGTTCAAATCGGTGGAGGAGCTGAAAAACGTGAAGGGCATCGGTGATGCGGTGCTGAACAAGTTGAAGGCGGAGGCGACG
GTTTCTTCTGCCGCGCCTAAGGCCGCACAGCCTGCCGTGAAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| comE | Neisseria gonorrhoeae MS11 |
62.626 |
100 |
0.653 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
54.321 |
85.263 |
0.463 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.186 |
90.526 |
0.4 |