Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | FAH66_RS09955 | Genome accession | NZ_CP039887 |
| Coordinates | 2036805..2037299 (+) | Length | 164 a.a. |
| NCBI ID | WP_167480347.1 | Uniprot ID | - |
| Organism | Neisseria subflava strain ATCC 49275 | ||
| Function | DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2031805..2042299
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAH66_RS09930 (FAH66_09930) | gltS | 2032055..2033269 (-) | 1215 | WP_137041460.1 | sodium/glutamate symporter | - |
| FAH66_RS09940 (FAH66_09940) | - | 2033487..2034893 (-) | 1407 | WP_137041462.1 | tetratricopeptide repeat protein | - |
| FAH66_RS09945 (FAH66_09945) | - | 2035248..2036054 (-) | 807 | WP_137041463.1 | integrase core domain-containing protein | - |
| FAH66_RS09950 (FAH66_09950) | comE | 2036334..2036621 (+) | 288 | WP_036472233.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| FAH66_RS09955 (FAH66_09955) | comP | 2036805..2037299 (+) | 495 | WP_167480347.1 | type IV pilin protein | Machinery gene |
| FAH66_RS09960 (FAH66_09960) | uvrB | 2037554..2039578 (+) | 2025 | WP_137041464.1 | excinuclease ABC subunit UvrB | - |
| FAH66_RS09965 (FAH66_09965) | - | 2039624..2040259 (+) | 636 | WP_039405269.1 | HEPN domain-containing protein | - |
| FAH66_RS09970 (FAH66_09970) | xth | 2040508..2041278 (-) | 771 | WP_137041465.1 | exodeoxyribonuclease III | - |
| FAH66_RS09980 (FAH66_09980) | - | 2041446..2041724 (-) | 279 | WP_137041466.1 | metalloregulator ArsR/SmtB family transcription factor | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18187.18 Da Isoelectric Point: 9.9431
>NTDB_id=360960 FAH66_RS09955 WP_167480347.1 2036805..2037299(+) (comP) [Neisseria subflava strain ATCC 49275]
MYLNVFDGKRNRATVQRGYSLIQLLVVILVASILATVAFTAYRESVRSANLRAAHAALLENARFMEQFYTKKGSFKLTST
KWPELPVKEAGGFCIRMSGQAKGILEGKFTLKAVALDREAEPRVLRLNESLTAVVCEKMKGKGSCMDGEEIFRGNDAECR
PFTG
MYLNVFDGKRNRATVQRGYSLIQLLVVILVASILATVAFTAYRESVRSANLRAAHAALLENARFMEQFYTKKGSFKLTST
KWPELPVKEAGGFCIRMSGQAKGILEGKFTLKAVALDREAEPRVLRLNESLTAVVCEKMKGKGSCMDGEEIFRGNDAECR
PFTG
Nucleotide
Download Length: 495 bp
>NTDB_id=360960 FAH66_RS09955 WP_167480347.1 2036805..2037299(+) (comP) [Neisseria subflava strain ATCC 49275]
ATGTACTTAAATGTATTTGATGGAAAACGGAATAGGGCAACTGTGCAGAGGGGCTACTCTTTGATACAGCTGTTGGTGGT
GATATTGGTGGCTTCGATATTGGCGACGGTGGCATTTACGGCCTACCGGGAATCGGTCCGCTCGGCCAACCTGCGTGCGG
CGCATGCCGCCCTGCTGGAAAATGCGCGCTTTATGGAGCAGTTCTATACGAAAAAGGGCAGCTTTAAGCTGACGTCGACG
AAGTGGCCGGAGCTGCCGGTGAAGGAGGCGGGTGGTTTCTGCATCAGGATGAGCGGTCAGGCTAAGGGGATCTTGGAGGG
GAAGTTTACCCTGAAGGCGGTGGCGTTGGACAGGGAGGCGGAGCCGAGGGTGTTGCGCTTGAACGAGTCGCTGACGGCGG
TGGTGTGCGAGAAGATGAAGGGGAAGGGCAGCTGTATGGACGGCGAGGAGATATTTAGGGGCAATGATGCGGAGTGTCGG
CCTTTTACGGGGTAG
ATGTACTTAAATGTATTTGATGGAAAACGGAATAGGGCAACTGTGCAGAGGGGCTACTCTTTGATACAGCTGTTGGTGGT
GATATTGGTGGCTTCGATATTGGCGACGGTGGCATTTACGGCCTACCGGGAATCGGTCCGCTCGGCCAACCTGCGTGCGG
CGCATGCCGCCCTGCTGGAAAATGCGCGCTTTATGGAGCAGTTCTATACGAAAAAGGGCAGCTTTAAGCTGACGTCGACG
AAGTGGCCGGAGCTGCCGGTGAAGGAGGCGGGTGGTTTCTGCATCAGGATGAGCGGTCAGGCTAAGGGGATCTTGGAGGG
GAAGTTTACCCTGAAGGCGGTGGCGTTGGACAGGGAGGCGGAGCCGAGGGTGTTGCGCTTGAACGAGTCGCTGACGGCGG
TGGTGTGCGAGAAGATGAAGGGGAAGGGCAGCTGTATGGACGGCGAGGAGATATTTAGGGGCAATGATGCGGAGTGTCGG
CCTTTTACGGGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Neisseria subflava NJ9703 |
92.073 |
100 |
0.921 |
| comP | Neisseria meningitidis 8013 |
49.664 |
90.854 |
0.451 |
| comP | Neisseria gonorrhoeae MS11 |
49.66 |
89.634 |
0.445 |