Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   E8M06_RS11140 Genome accession   NZ_CP039462
Coordinates   2281063..2282259 (+) Length   398 a.a.
NCBI ID   WP_136581680.1    Uniprot ID   -
Organism   Streptococcus suis strain WUSS351     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2276063..2287259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M06_RS11095 (E8M06_11105) - 2276756..2277397 (+) 642 WP_044687191.1 replication protein -
  E8M06_RS11100 (E8M06_11110) - 2277403..2277687 (+) 285 WP_015647601.1 hypothetical protein -
  E8M06_RS11105 (E8M06_11115) - 2277680..2278012 (+) 333 WP_044676808.1 DUF771 domain-containing protein -
  E8M06_RS11110 (E8M06_11120) - 2278075..2279196 (+) 1122 WP_044687193.1 site-specific integrase -
  E8M06_RS11130 (E8M06_11140) - 2279702..2280385 (-) 684 WP_053867304.1 YoaK family protein -
  E8M06_RS11135 (E8M06_11145) rlmH 2280410..2280889 (-) 480 WP_004194528.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E8M06_RS11140 (E8M06_11150) htrA 2281063..2282259 (+) 1197 WP_136581680.1 trypsin-like peptidase domain-containing protein Regulator
  E8M06_RS11145 (E8M06_11155) spo0J 2282320..2283084 (+) 765 WP_099833035.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 398 a.a.        Molecular weight: 41880.91 Da        Isoelectric Point: 4.4971

>NTDB_id=358870 E8M06_RS11140 WP_136581680.1 2281063..2282259(+) (htrA) [Streptococcus suis strain WUSS351]
MERIPYMKKYLKFAILFVIGFFGGLIGALSASFFQPQVQQANSAITSVSNVQYNNETSTTKAVEKVQNAVVSVINYQKSA
NNSLGAIFGNIESSDELAVAGEGSGVIYKKDGQYAYIVTNTHVINNAEKIDILLASGEKISGELVGSDTYSDIAVIKISA
DKVTTVAEFADSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQSEDGQTISTNAIQTDTAINPGNSGGPLIN
IQGQVIGITSSKITSSSVSSSGVAVEGMGFAIPANDAVAIINQLEKDGKVSRPALGVHMVNLTTLSTSQLEKAGLSNTEL
TSGVVIVSTQSGLPADGKLETFDVITEIDGEAIQNKSDLQSALYKHQIGDTITITYYRNNQKQTVDIKLTHSTEELSE

Nucleotide


Download         Length: 1197 bp        

>NTDB_id=358870 E8M06_RS11140 WP_136581680.1 2281063..2282259(+) (htrA) [Streptococcus suis strain WUSS351]
ATGGAAAGGATTCCTTATATGAAAAAATATTTGAAATTTGCGATTCTATTTGTAATTGGATTTTTTGGGGGTCTTATCGG
GGCCTTATCAGCCTCTTTCTTCCAACCACAGGTTCAACAAGCAAATTCTGCTATCACTAGTGTCAGCAATGTTCAATATA
ATAATGAAACTTCCACCACAAAAGCTGTAGAGAAAGTACAAAATGCTGTTGTGTCTGTTATTAATTACCAAAAGTCAGCC
AACAATAGTCTTGGTGCTATCTTTGGAAATATTGAATCATCTGACGAACTAGCTGTTGCTGGAGAGGGGTCTGGGGTTAT
CTATAAAAAAGATGGTCAATATGCCTATATTGTGACAAATACACATGTTATTAATAACGCAGAAAAAATTGATATTCTTT
TAGCATCTGGAGAAAAAATCAGCGGTGAACTCGTTGGTTCCGATACCTATTCTGATATAGCTGTTATAAAAATATCAGCA
GATAAAGTCACTACTGTTGCTGAATTTGCTGATTCCGATACAATTAAAGTTGGAGAAACTGCTATCGCAATTGGTAGTCC
TCTAGGTAGTGTCTACGCCAATACAGTTACTCAAGGTATTATTTCCAGCCTAAGTCGGACAGTTACTTCACAATCAGAAG
ACGGACAAACAATCTCAACCAATGCTATTCAAACCGATACAGCTATCAACCCAGGAAACTCTGGAGGACCATTGATTAAT
ATACAAGGACAAGTTATTGGTATCACCTCTAGCAAAATCACCTCAAGTTCTGTAAGTAGCTCAGGTGTGGCTGTGGAAGG
GATGGGATTTGCTATTCCTGCAAATGATGCCGTAGCTATTATCAATCAACTTGAAAAAGATGGAAAAGTTAGCCGACCTG
CTCTTGGAGTTCATATGGTTAACTTGACGACCTTGTCAACTAGTCAATTGGAAAAAGCTGGATTATCAAATACGGAATTA
ACATCTGGTGTAGTAATTGTCTCTACACAAAGTGGGCTACCTGCAGATGGAAAATTAGAAACTTTTGATGTTATTACTGA
GATTGACGGAGAAGCTATTCAAAATAAGAGTGATCTACAGAGCGCTCTCTACAAACATCAAATTGGAGATACAATCACTA
TAACTTATTACCGCAACAATCAGAAACAAACTGTTGACATTAAGTTGACACATTCTACAGAAGAACTTAGCGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.705

99.749

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

60.253

99.246

0.598

  htrA Streptococcus pneumoniae D39

58.015

98.744

0.573

  htrA Streptococcus pneumoniae TIGR4

58.015

98.744

0.573

  htrA Streptococcus mitis NCTC 12261

58.015

98.744

0.573

  htrA Streptococcus pneumoniae R6

58.015

98.744

0.573

  htrA Streptococcus pneumoniae Rx1

58.015

98.744

0.573


Multiple sequence alignment