Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   E8M05_RS11185 Genome accession   NZ_CP039457
Coordinates   2147537..2148802 (+) Length   421 a.a.
NCBI ID   WP_013852370.1    Uniprot ID   A0AAE6YQ67
Organism   Streptococcus pasteurianus strain WUSP067     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2142537..2153802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS11155 (E8M05_11145) - 2143004..2145598 (+) 2595 WP_136596478.1 YfhO family protein -
  E8M05_RS11170 (E8M05_11160) - 2146155..2146298 (+) 144 WP_160312943.1 hypothetical protein -
  E8M05_RS11180 (E8M05_11170) rlmH 2146847..2147326 (-) 480 WP_003067023.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E8M05_RS11185 (E8M05_11175) htrA 2147537..2148802 (+) 1266 WP_013852370.1 S1C family serine protease Regulator
  E8M05_RS11190 (E8M05_11180) spo0J 2148862..2149638 (+) 777 WP_003067028.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 43814.70 Da        Isoelectric Point: 4.1803

>NTDB_id=358816 E8M05_RS11185 WP_013852370.1 2147537..2148802(+) (htrA) [Streptococcus pasteurianus strain WUSP067]
MKKIKLPKLPKLPKFNYKNWLKPLGVILVGFIAGIAGTILVLNMAGISITNVSGSSTKTTTSSVSYSNSNDTTKAVEKVQ
DAVVSVINYKSDSSSSASDLYNQMFGNDSDSSSNSSSTDDLTVYSEGSGVIYKKDGDSAYVVTNNHVIDGAEQIEIMLAN
GTKVVGELVGADTYSDIAVVKISSDNVSTVAEFADSDKLTVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDDGE
TISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVSIINQLEENGQVIRPALGIS
MINLSDLSTNAIAQLNIPTSVTSGVVVAAVQSGMPAEGNLEQYDVITAIDDKEVTSTSDLQSILYTHSVGDSVKVTFYRG
TDKKTATIELTKTTQDLSSSN

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=358816 E8M05_RS11185 WP_013852370.1 2147537..2148802(+) (htrA) [Streptococcus pasteurianus strain WUSP067]
GTGAAAAAAATAAAATTACCAAAATTACCCAAGTTACCAAAATTTAATTACAAAAATTGGTTAAAACCATTGGGTGTCAT
TTTAGTCGGCTTTATAGCTGGTATCGCAGGTACAATACTCGTCCTAAACATGGCAGGTATTTCAATCACTAACGTCAGTG
GTTCAAGTACAAAAACAACAACAAGTAGCGTAAGCTATTCTAACTCTAACGATACAACAAAAGCTGTGGAAAAAGTTCAA
GACGCGGTTGTATCTGTTATTAACTACAAATCAGACTCGTCATCTTCTGCAAGTGACCTCTACAATCAAATGTTTGGCAA
TGACTCAGACAGTAGTAGCAATTCAAGCTCTACAGATGATTTGACTGTTTACAGTGAGGGGTCTGGGGTTATTTACAAAA
AAGATGGTGATTCTGCCTATGTCGTCACTAACAATCACGTTATTGATGGTGCCGAACAAATTGAAATTATGCTTGCTAAT
GGAACAAAAGTTGTTGGTGAGCTAGTCGGAGCAGATACTTATTCAGATATTGCTGTTGTTAAAATTTCTTCTGACAATGT
ATCTACAGTTGCTGAATTTGCCGATTCTGATAAATTGACTGTCGGTGAAACTGCTATCGCTATTGGTAGCCCACTTGGTA
CTGAATATGCTAACTCTGTAACACAAGGTATTGTCTCAAGTCTTAGCCGTACAGTAACCATGACAAATGATGATGGTGAA
ACTATCTCAACAAATGCTATCCAAACAGATGCAGCAATTAACCCAGGTAACTCTGGTGGTGCTTTAATTAACATTGAAGG
ACAAGTTATCGGTATCAATTCAAGTAAGATTTCATCTACATCAAGTTCTGGTGAATCTGTCGAAGGTATGGGATTTGCCA
TTCCATCTAACGATGTTGTATCCATTATTAACCAATTGGAAGAAAATGGGCAAGTTATCCGCCCAGCACTTGGTATTTCA
ATGATAAACTTGAGCGACCTTTCAACTAATGCAATTGCTCAACTTAACATTCCAACAAGTGTAACAAGCGGTGTCGTTGT
TGCCGCTGTTCAATCTGGTATGCCTGCTGAAGGTAATCTCGAACAGTACGATGTCATCACAGCTATTGACGACAAAGAAG
TAACATCTACTTCAGATCTTCAAAGTATTCTTTATACTCATTCTGTTGGTGACTCTGTCAAAGTAACCTTCTACCGTGGA
ACTGATAAGAAAACAGCTACAATTGAATTAACTAAGACAACGCAAGATTTATCTTCCTCAAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.938

96.2

0.625

  htrA Streptococcus gordonii str. Challis substr. CH1

59.804

96.912

0.58

  htrA Streptococcus pneumoniae D39

57.664

97.625

0.563

  htrA Streptococcus pneumoniae TIGR4

57.664

97.625

0.563

  htrA Streptococcus mitis NCTC 12261

57.664

97.625

0.563

  htrA Streptococcus pneumoniae R6

57.664

97.625

0.563

  htrA Streptococcus pneumoniae Rx1

57.664

97.625

0.563


Multiple sequence alignment