Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E4Z61_RS15325 | Genome accession | NZ_CP038469 |
| Coordinates | 3051857..3052390 (-) | Length | 177 a.a. |
| NCBI ID | WP_135323521.1 | Uniprot ID | - |
| Organism | Citrobacter tructae strain SNU WT2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3046857..3057390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4Z61_RS15295 (E4Z61_15300) | soxR | 3047843..3048301 (-) | 459 | WP_135323516.1 | redox-sensitive transcriptional activator SoxR | - |
| E4Z61_RS15300 (E4Z61_15305) | soxS | 3048388..3048711 (+) | 324 | WP_135323517.1 | superoxide response transcriptional regulator SoxS | - |
| E4Z61_RS15305 (E4Z61_15310) | - | 3048714..3050300 (-) | 1587 | WP_135323518.1 | EAL domain-containing protein | - |
| E4Z61_RS15315 (E4Z61_15320) | - | 3050975..3051256 (+) | 282 | WP_135323520.1 | YjcB family protein | - |
| E4Z61_RS15320 (E4Z61_15325) | - | 3051438..3051740 (-) | 303 | WP_240703826.1 | hypothetical protein | - |
| E4Z61_RS15325 (E4Z61_15330) | ssb | 3051857..3052390 (-) | 534 | WP_135323521.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| E4Z61_RS15330 (E4Z61_15335) | uvrA | 3052641..3055463 (+) | 2823 | WP_135323522.1 | excinuclease ABC subunit UvrA | - |
| E4Z61_RS15335 (E4Z61_15340) | - | 3055505..3055858 (-) | 354 | WP_135323523.1 | MmcQ/YjbR family DNA-binding protein | - |
| E4Z61_RS15340 (E4Z61_15345) | aphA | 3055985..3056698 (-) | 714 | WP_135323524.1 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 18778.79 Da Isoelectric Point: 5.2456
>NTDB_id=354684 E4Z61_RS15325 WP_135323521.1 3051857..3052390(-) (ssb) [Citrobacter tructae strain SNU WT2]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGNAGGGQQGGWGQPQQPQGGNQFSGGAQSRPQQSAP
GAPSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGNAGGGQQGGWGQPQQPQGGNQFSGGAQSRPQQSAP
GAPSNEPPMDFDDDIPF
Nucleotide
Download Length: 534 bp
>NTDB_id=354684 E4Z61_RS15325 WP_135323521.1 3051857..3052390(-) (ssb) [Citrobacter tructae strain SNU WT2]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCCAGCGAATATCTGCGTAAAGGTTCTCAGGTCTACATT
GAAGGTCAACTGCGTACCCGTAAATGGACCGACCAGTCTGGTGTCGAGAAGTACACCACTGAAGTTGTTGTTAACGTCGG
TGGCACCATGCAAATGCTGGGTGGTCGTCAGGGCGGTGGTGCACCGGCAGGTGGTAATGCAGGTGGTGGTCAACAGGGTG
GTTGGGGTCAGCCTCAGCAGCCACAGGGTGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCTGCTCCG
GGAGCACCGTCTAACGAACCACCGATGGACTTTGACGACGATATTCCATTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCCAGCGAATATCTGCGTAAAGGTTCTCAGGTCTACATT
GAAGGTCAACTGCGTACCCGTAAATGGACCGACCAGTCTGGTGTCGAGAAGTACACCACTGAAGTTGTTGTTAACGTCGG
TGGCACCATGCAAATGCTGGGTGGTCGTCAGGGCGGTGGTGCACCGGCAGGTGGTAATGCAGGTGGTGGTCAACAGGGTG
GTTGGGGTCAGCCTCAGCAGCCACAGGGTGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGTCTGCTCCG
GGAGCACCGTCTAACGAACCACCGATGGACTTTGACGACGATATTCCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
73.889 |
100 |
0.751 |
| ssb | Glaesserella parasuis strain SC1401 |
56.044 |
100 |
0.576 |
| ssb | Neisseria meningitidis MC58 |
46.961 |
100 |
0.48 |
| ssb | Neisseria gonorrhoeae MS11 |
46.961 |
100 |
0.48 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
38.333 |
100 |
0.39 |