Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ES276_RS01770 Genome accession   NZ_CP038252
Coordinates   325298..326335 (+) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain TVO_1901936     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 320298..331335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES276_RS01735 (ES276_01840) yidC 320333..321259 (-) 927 WP_000835955.1 membrane protein insertase YidC -
  ES276_RS01740 (ES276_01845) - 321337..321615 (-) 279 WP_001174612.1 acylphosphatase -
  ES276_RS01745 (ES276_01850) - 321649..322389 (+) 741 WP_000152703.1 RNA methyltransferase -
  ES276_RS01750 (ES276_01855) - 322445..323128 (+) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  ES276_RS01755 (ES276_01865) asnA 323240..324232 (+) 993 WP_000747993.1 aspartate--ammonia ligase -
  ES276_RS01760 (ES276_01870) rsmD 324297..324836 (+) 540 WP_000706963.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ES276_RS01765 (ES276_01875) coaD 324826..325314 (+) 489 WP_238093031.1 pantetheine-phosphate adenylyltransferase -
  ES276_RS01770 (ES276_01880) sepM 325298..326335 (+) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  ES276_RS01775 (ES276_01885) - 326393..326623 (+) 231 WP_000250384.1 DUF1146 family protein -
  ES276_RS01780 (ES276_01890) murA 326647..327930 (+) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ES276_RS01785 (ES276_01895) - 327923..328111 (+) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  ES276_RS01790 (ES276_01900) endA 328150..328974 (+) 825 WP_001036779.1 DNA-entry nuclease EndA Machinery gene
  ES276_RS01795 (ES276_01905) - 329203..330534 (+) 1332 WP_000390039.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=352602 ES276_RS01770 WP_000727277.1 325298..326335(+) (sepM) [Streptococcus pneumoniae strain TVO_1901936]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=352602 ES276_RS01770 WP_000727277.1 325298..326335(+) (sepM) [Streptococcus pneumoniae strain TVO_1901936]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment