Detailed information NTG0352602

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: GE024_RS07305
• Genome accession: NZ_CP046521
• Coordinates: 1441516..1442478 (-)
• Length: 320 a.a.
• NCBI ID: WP_003044168.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_100
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1436516..1447478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE024_RS07280 (GE024_07295)	-	1437556..1437630 (-)	75	Protein_1388	HAD family phosphatase	-
GE024_RS07285 (GE024_07300)	-	1437648..1438307 (-)	660	WP_003044158.1	HAD-IA family hydrolase	-
GE024_RS07290 (GE024_07305)	-	1438307..1438849 (-)	543	WP_093998762.1	GNAT family N-acetyltransferase	-
GE024_RS07295 (GE024_07310)	-	1439072..1439512 (-)	441	WP_232038583.1	NADPH-dependent FMN reductase	-
GE024_RS07300 (GE024_07315)	pepF	1439701..1441503 (-)	1803	WP_093998763.1	oligoendopeptidase F	Regulator
GE024_RS07305 (GE024_07320)	coiA	1441516..1442478 (-)	963	WP_003044168.1	competence protein CoiA	Machinery gene
GE024_RS07310 (GE024_07325)	-	1442595..1443758 (-)	1164	WP_093998764.1	MFS transporter	-
GE024_RS07315 (GE024_07330)	-	1443849..1444565 (-)	717	WP_093998765.1	pseudouridine synthase	-
GE024_RS07320 (GE024_07335)	nagB	1444683..1445387 (-)	705	WP_003044177.1	glucosamine-6-phosphate deaminase	-
GE024_RS07325 (GE024_07340)	queA	1445592..1446620 (+)	1029	WP_093998766.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37420.44 Da
• Isoelectric Point: 9.9123

>NTDB_id=352602 GE024_RS07305 WP_003044168.1 1441516..1442478(-) (coiA) [Streptococcus canis strain HL_100]
MTRILTALDDKNQLISLVTQPISSKTPFRCPACQSPVHLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLLVNDGLALEIQCSPLPVERLKERTKAYQEQGYQVRWLLGRKLWLKAHLTALQKQFLYFSS
SLGFHLWELDAATNLLRLKYLIHEDLFGKVSYLTKTISLDNDIMGLFRLPYQQEILYSYQKSMVDNLSIKIQRALLARQP
KWLRRQEKAYLAGHNLLTLATDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKAYYKKEKDKKVQTLFSPKYYVKIDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=352602 GE024_RS07305 WP_003044168.1 1441516..1442478(-) (coiA) [Streptococcus canis strain HL_100]
GTGACAAGGATACTAACCGCTTTAGATGATAAGAATCAGCTTATTTCGCTAGTGACTCAGCCTATTTCTTCAAAAACGCC
TTTTCGTTGCCCAGCCTGCCAGTCCCCTGTTCACTTGCGTCAAGGAACAATTAGACGACCTCATTTTGCCCATGTGCAAC
TAGCTCATTGTCAATTTCAAGCAGAAAATGAATCTGAGGAACATTTGACATTGAAAGCAAAACTTTATACCAGTTTAGTC
CGAACAGAAGCCGTTTGTATTGAAAAATATCTACCTGAGCTGCAGCAGATCGCAGACCTTTTGGTTAATGATGGCTTGGC
GTTAGAAATTCAATGTAGCCCCTTGCCAGTTGAGCGCCTAAAGGAACGCACCAAAGCCTATCAAGAACAAGGCTATCAGG
TACGATGGTTACTAGGAAGGAAATTGTGGCTTAAAGCTCATTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTAGGCTTTCATTTGTGGGAGCTGGATGCAGCTACAAATCTGCTGCGTCTAAAATATTTAATCCATGAAGACTTATT
TGGCAAGGTGAGCTACCTAACCAAAACCATTTCTTTAGACAACGATATCATGGGACTGTTTCGGTTACCTTATCAGCAAG
AAATCCTCTATTCTTATCAGAAATCAATGGTCGATAACCTTTCTATAAAAATTCAAAGAGCGCTGCTAGCTAGACAGCCT
AAATGGCTACGACGACAAGAAAAGGCTTACCTAGCAGGACATAATTTACTCACATTAGCAACTGATGCTTTTTATCCCCA
ATGGAGACCAGTTCAATCTTCTAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGTCCTTATTATGAAAGTTTTAAAGCCT
ATTATAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATAGATAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (18-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	43.871	96.875	0.425
coiA	Streptococcus pneumoniae Rx1	43.548	96.875	0.422
coiA	Streptococcus pneumoniae D39	43.548	96.875	0.422
coiA	Streptococcus pneumoniae R6	43.548	96.875	0.422
coiA	Streptococcus pneumoniae TIGR4	43.548	96.875	0.422
coiA	Lactococcus lactis subsp. cremoris KW2	39.877	100	0.406