Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E3U44_RS07510 Genome accession   NZ_CP038033
Coordinates   1534582..1534935 (-) Length   117 a.a.
NCBI ID   WP_134359708.1    Uniprot ID   A0A4P7C6E4
Organism   Nitrosococcus wardiae strain D1FHS     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1529582..1539935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3U44_RS07490 (E3U44_07490) - 1531002..1531856 (-) 855 WP_134357568.1 CheR family methyltransferase -
  E3U44_RS07495 (E3U44_07495) - 1531873..1533486 (-) 1614 WP_134357570.1 methyl-accepting chemotaxis protein -
  E3U44_RS07500 (E3U44_07500) - 1533570..1534118 (-) 549 WP_134357571.1 chemotaxis protein CheW -
  E3U44_RS07505 (E3U44_07505) - 1534131..1534496 (-) 366 WP_134357573.1 response regulator transcription factor -
  E3U44_RS07510 (E3U44_07510) pilG 1534582..1534935 (-) 354 WP_134359708.1 response regulator Regulator
  E3U44_RS07515 (E3U44_07515) - 1535370..1536056 (+) 687 WP_166805026.1 hypothetical protein -
  E3U44_RS07520 (E3U44_07520) - 1536144..1537262 (+) 1119 WP_240761767.1 hypothetical protein -
  E3U44_RS07525 (E3U44_07525) - 1537299..1537847 (+) 549 WP_240761768.1 GTP-binding protein -
  E3U44_RS07530 (E3U44_07530) - 1537840..1538469 (+) 630 WP_134357577.1 hypothetical protein -

Sequence

Protein


Download         Length: 117 a.a.        Molecular weight: 13161.32 Da        Isoelectric Point: 7.7003

>NTDB_id=351655 E3U44_RS07510 WP_134359708.1 1534582..1534935(-) (pilG) [Nitrosococcus wardiae strain D1FHS]
MVIDDSKTIRKTAETLLKKVGCEVVTAEDGFEALPKINQYHPDIIFIDIMMPRLDGYQTCTLIKNNAAFKKTPVIMLSSK
DGLFDRARGRIVGCDQYLTKPFTREELLGAISSHCNH

Nucleotide


Download         Length: 354 bp        

>NTDB_id=351655 E3U44_RS07510 WP_134359708.1 1534582..1534935(-) (pilG) [Nitrosococcus wardiae strain D1FHS]
ATGGTCATCGATGATAGTAAGACTATTCGGAAAACAGCGGAAACCTTACTTAAAAAAGTTGGCTGTGAGGTAGTCACAGC
AGAAGACGGATTCGAAGCTCTTCCCAAAATCAACCAATACCATCCAGATATCATATTTATAGACATTATGATGCCGAGAT
TAGATGGGTACCAAACCTGTACCTTGATAAAAAACAATGCTGCATTCAAGAAAACTCCAGTGATTATGCTCTCCAGTAAA
GATGGTTTGTTTGACCGGGCCCGTGGACGCATCGTTGGCTGTGATCAGTATCTAACAAAGCCCTTTACTCGTGAAGAACT
CTTGGGTGCTATTTCAAGCCACTGCAATCATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P7C6E4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.69

99.145

0.701
  pilH Synechocystis sp. PCC 6803

43.243

94.872

0.41
  vicR Streptococcus mutans UA159

40

98.291

0.393
  chpA Acinetobacter baumannii strain A118

39.823

96.581

0.385
  micA Streptococcus pneumoniae Cp1015

38.053

96.581

0.368

Multiple sequence alignment