Detailed information NTG0347278

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KAN02_RS01680
• Genome accession: NZ_CP036171
• Coordinates: 357802..358860 (+)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: A0AAV3IQ41
• Organism: Acinetobacter nosocomialis strain KAN02
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 352802..363860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAN02_RS01665 (KAN02_01665)	-	353905..354237 (+)	333	WP_087606412.1	hypothetical protein	-
KAN02_RS01670 (KAN02_01670)	-	354240..355064 (+)	825	WP_087606413.1	putative RNA methyltransferase	-
KAN02_RS01675 (KAN02_01675)	ponA	355082..357640 (-)	2559	WP_031982123.1	penicillin-binding protein PBP1a	-
KAN02_RS01680 (KAN02_01680)	comM	357802..358860 (+)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
KAN02_RS01685 (KAN02_01685)	pilN	358860..359504 (+)	645	WP_087606414.1	PilN domain-containing protein	Machinery gene
KAN02_RS01690 (KAN02_01690)	pilO	359501..360241 (+)	741	WP_087606415.1	type 4a pilus biogenesis protein PilO	Machinery gene
KAN02_RS01695 (KAN02_01695)	pilP	360252..360779 (+)	528	WP_087606416.1	pilus assembly protein PilP	Machinery gene
KAN02_RS01700 (KAN02_01700)	pilQ	360842..363007 (+)	2166	WP_087606417.1	type IV pilus secretin PilQ family protein	Machinery gene
KAN02_RS01705 (KAN02_01705)	aroK	363019..363588 (+)	570	WP_002051689.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=347278 KAN02_RS01680 WP_004711654.1 357802..358860(+) (comM) [Acinetobacter nosocomialis strain KAN02]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=347278 KAN02_RS01680 WP_004711654.1 357802..358860(+) (comM) [Acinetobacter nosocomialis strain KAN02]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGTGGTAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCCTCTCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGTACTTTGCCAGATGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTCTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAACAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426