Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EXW25_RS06415 | Genome accession | NZ_CP036111 |
| Coordinates | 1248566..1248889 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578873.1 | Uniprot ID | A0A2B5EZM0 |
| Organism | Bacillus toyonensis strain JAS411 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 1243566..1253889
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXW25_RS06390 (EXW25_06500) | - | 1243841..1245127 (+) | 1287 | WP_097954229.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| EXW25_RS06395 (EXW25_06505) | sipW | 1245323..1245892 (+) | 570 | WP_000767788.1 | signal peptidase I SipW | - |
| EXW25_RS06400 (EXW25_06510) | - | 1245955..1246542 (+) | 588 | WP_000172853.1 | CalY family protein | - |
| EXW25_RS06405 (EXW25_06515) | - | 1246664..1247479 (+) | 816 | WP_215595891.1 | DUF4047 domain-containing protein | - |
| EXW25_RS06410 (EXW25_06520) | calY | 1247890..1248483 (+) | 594 | WP_000053723.1 | biofilm matrix protein CalY | - |
| EXW25_RS06415 (EXW25_06525) | sinR | 1248566..1248889 (-) | 324 | WP_000578873.1 | helix-turn-helix domain-containing protein | Regulator |
| EXW25_RS06420 (EXW25_06530) | - | 1248969..1249103 (-) | 135 | WP_000276222.1 | anti-repressor SinI family protein | - |
| EXW25_RS06425 (EXW25_06535) | inhA1 | 1249449..1251836 (+) | 2388 | WP_097954228.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| EXW25_RS06430 (EXW25_06540) | - | 1251994..1253361 (+) | 1368 | WP_097954227.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12389.26 Da Isoelectric Point: 9.6238
>NTDB_id=346874 EXW25_RS06415 WP_000578873.1 1248566..1248889(-) (sinR) [Bacillus toyonensis strain JAS411]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETEKEARLDSEWTQLV
KDAMNSGVSKEQFREFLEFTQWKKNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETEKEARLDSEWTQLV
KDAMNSGVSKEQFREFLEFTQWKKNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=346874 EXW25_RS06415 WP_000578873.1 1248566..1248889(-) (sinR) [Bacillus toyonensis strain JAS411]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGACGAAACAGAAAAGGAAGCTCGCCTAGACTCCGAATGGACACAGCTCGTT
AAAGACGCAATGAACTCTGGTGTCTCTAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAGTGGAAGAAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGACGAAACAGAAAAGGAAGCTCGCCTAGACTCCGAATGGACACAGCTCGTT
AAAGACGCAATGAACTCTGGTGTCTCTAAAGAACAGTTTCGTGAATTTCTTGAATTTACACAGTGGAAGAAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
68.807 |
100 |
0.701 |