Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EXW33_RS18280 Genome accession   NZ_CP036014
Coordinates   3552485..3552661 (+) Length   58 a.a.
NCBI ID   WP_001003338.1    Uniprot ID   A0A1V6LL20
Organism   Bacillus toyonensis strain BPN45/4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3547485..3557661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EXW33_RS18260 (EXW33_18685) clpC 3547802..3550402 (+) 2601 WP_000365397.1 ATP-dependent chaperone ClpB Regulator
  EXW33_RS18265 (EXW33_18690) - 3550439..3550621 (-) 183 WP_001211112.1 YjzD family protein -
  EXW33_RS18270 (EXW33_18695) - 3550778..3551512 (+) 735 WP_000028709.1 hypothetical protein -
  EXW33_RS18275 (EXW33_18700) - 3551542..3552420 (+) 879 WP_000486172.1 NAD(P)-dependent oxidoreductase -
  EXW33_RS18280 (EXW33_18705) comZ 3552485..3552661 (+) 177 WP_001003338.1 ComZ family protein Regulator
  EXW33_RS18285 (EXW33_18710) fabH 3552906..3553838 (+) 933 WP_001100553.1 beta-ketoacyl-ACP synthase III -
  EXW33_RS18290 (EXW33_18715) fabF 3553869..3555107 (+) 1239 WP_000412641.1 beta-ketoacyl-ACP synthase II -
  EXW33_RS18295 (EXW33_18720) - 3555215..3556006 (+) 792 WP_000539317.1 DUF2268 domain-containing putative Zn-dependent protease -
  EXW33_RS18300 (EXW33_18725) - 3556149..3556895 (+) 747 WP_000966122.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6606.76 Da        Isoelectric Point: 4.4963

>NTDB_id=345895 EXW33_RS18280 WP_001003338.1 3552485..3552661(+) (comZ) [Bacillus toyonensis strain BPN45/4]
MNEKSMQFLQIAMKHLPEAKAILDSNGIELDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=345895 EXW33_RS18280 WP_001003338.1 3552485..3552661(+) (comZ) [Bacillus toyonensis strain BPN45/4]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAGGCAAAGGCAATTTTAGATTCGAATGG
AATTGAGCTTGATATGGAGAAGGCACAACCAGTGTTAGAGTTATTAATGAAAGTTATGAATGAAGCATATGAGCTTGGGA
AAGCAGACAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LL20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.636

94.828

0.603

Multiple sequence alignment